Javad Zahiri

Javad Zahiri

University of California, San Diego

H-index: 17

North America-United States

About Javad Zahiri

Javad Zahiri, With an exceptional h-index of 17 and a recent h-index of 17 (since 2020), a distinguished researcher at University of California, San Diego, specializes in the field of Bioinformatics, Evolution, Neurosciences, Machine learning, Biological networks.

His recent articles reflect a diverse array of research interests and contributions to the field:

123VCF: an intuitive and efficient tool for filtering VCF files

Transcriptomic Analysis of Cyclamen persicum to Identify Invovled Genes in Triterpene Secondary Metabolites Pathway

AI‐Enhanced Detection of Clinically Relevant Structural and Functional Anomalies in MRI: Traversing the Landscape of Conventional to Explainable Approaches

123FASTQ: an intuitive and efficient tool for preprocessing Illumina FASTQ reads

Computational prediction of protein–protein interactions’ network in Arabidopsis thaliana

Language, Social, and Face Regions Are Affected in Toddlers with Autism and Predictive of Language Outcome

Reconstructing the cell–cell interaction network among mouse immune cells

RNA-Seq Analyzing Reveals the Key Role of SVR3 Gene in Tolerating the Freezing Stress in Saccharum spontaneum

Javad Zahiri Information

University

Position

Postdoctoral Scholar Employee Department of Neurosciences

Citations(all)

1616

Citations(since 2020)

1331

Cited By

513

hIndex(all)

17

hIndex(since 2020)

17

i10Index(all)

31

i10Index(since 2020)

26

Email

University Profile Page

University of California, San Diego

Google Scholar

View Google Scholar Profile

Javad Zahiri Skills & Research Interests

Bioinformatics

Evolution

Neurosciences

Machine learning

Biological networks

Top articles of Javad Zahiri

Title

Journal

Author(s)

Publication Date

123VCF: an intuitive and efficient tool for filtering VCF files

BMC bioinformatics

Milad Eidi

Samaneh Abdolalizadeh

Soheila Moeini

Masoud Garshasbi

Javad Zahiri

2024/12

Transcriptomic Analysis of Cyclamen persicum to Identify Invovled Genes in Triterpene Secondary Metabolites Pathway

Biochemical Genetics

Zahra Hekmati

Mahmood Solouki

Abbasali Emamjomeh

Javad Zahiri

Asghar Mirzaie-Asl

2024/4/5

AI‐Enhanced Detection of Clinically Relevant Structural and Functional Anomalies in MRI: Traversing the Landscape of Conventional to Explainable Approaches

Pegah Khosravi

Saber Mohammadi

Fatemeh Zahiri

Masoud Khodarahmi

Javad Zahiri

2024/1/19

123FASTQ: an intuitive and efficient tool for preprocessing Illumina FASTQ reads

bioRxiv

Milad Eidi

Samaneh Abdolalizadeh

Mohammad Hossein Nasirpour

Javad Zahiri

Masoud Garshasbi

2024

Computational prediction of protein–protein interactions’ network in Arabidopsis thaliana

Acta Physiologiae Plantarum

Zhale Hekmati

Javad Zahiri

Ali Aalami

2023/12

Language, Social, and Face Regions Are Affected in Toddlers with Autism and Predictive of Language Outcome

Research Square

Kuaikuai Duan

Lisa Eyler

Karen Pierce

Michael Lombardo

Michael Datko

...

2023/1/31

Reconstructing the cell–cell interaction network among mouse immune cells

Biotechnology and Bioengineering

Somayeh Azadian

Alireza Doustmohammadi

Mohadeseh Naseri

Masoud Khodarahmi

Seyed Shahriar Arab

...

2023/9

RNA-Seq Analyzing Reveals the Key Role of SVR3 Gene in Tolerating the Freezing Stress in Saccharum spontaneum

Journal of Plant Growth Regulation

Majedeh Neisi

Barat Ali Fakheri

Esmaeil Ebrahimie

Abbasali Emamjomeh

Javad Zahiri

...

2023/4

Level of attention to motherese speech as an early marker of autism spectrum disorder

JAMA network open

Karen Pierce

Teresa H Wen

Javad Zahiri

Charlene Andreason

Eric Courchesne

...

2023/2/1

A predictive ensemble classifier for the gene expression diagnosis of ASD at ages 1 to 4 years

Molecular psychiatry

Bokan Bao

Javad Zahiri

Vahid H Gazestani

Linda Lopez

Yaqiong Xiao

...

2023/2

Artificial Intelligence in Environmental Microbiology

Frontiers in Microbiology

Mohammad-Hossein Sarrafzadeh

Seyed Soheil Mansouri

Javad Zahiri

Solange I Mussatto

Hashem Asgharnejad

2022/6/13

PSSMCOOL: a comprehensive R package for generating evolutionary-based descriptors of protein sequences from PSSM profiles

Biology Methods and Protocols

Alireza Mohammadi

Javad Zahiri

Saber Mohammadi

Mohsen Khodarahmi

Seyed Shahriar Arab

2022/1/1

Using ortholog information from multiple species to predict barley protein-protein interaction network

Plant Gene

Zhale Hekmati

Ali Aalami

Javad Zahiri

2022/6/1

Identifying key lysosome-related genes associated with drug-resistant breast cancer using computational and systems biology approach

Iranian Journal of Pharmaceutical Research: IJPR

Aref Shiralipour

Babak Khorsand

Leila Jafari

Mohammad Salehi

Mahsa Kazemi

...

2022/12

Large scale validation of an early-age eye-tracking biomarker of an autism spectrum disorder subtype

Scientific reports

Teresa H Wen

Amanda Cheng

Charlene Andreason

Javad Zahiri

Yaqiong Xiao

...

2022/3/11

Discovering common pathogenic mechanisms of COVID-19 and Parkinson disease: an integrated bioinformatics analysis

Journal of Molecular Neuroscience

Aria Jahanimoghadam

Hadis Abdolahzadeh

Niloofar Khoshdel Rad

Javad Zahiri

2022/11

Investigation and characterization of human gut phageome in advanced liver cirrhosis of defined etiologies

Gut Pathogens

Mohadeseh Naseri

Fahimeh Palizban

Abbas Yadegar

Mohsen Khodarahmi

Hamid Asadzadeh Aghdaei

...

2022/2/15

Language and Social Regions Are Affected in Toddlers with Autism and Predict Later Language Outcome

medRxiv

Kuaikuai Duan

Lisa Eyler

Karen Pierce

Michael V Lombardo

Michael Datko

...

2022/10/26

The identification of the disease-causing mutations in genes associated with episodic coma in a family with three girls affected with this disorder using Next Generation …

Modares Journal of Biotechnology

Fatemeh Asadi

Javad Zahiri

2022/1/10

Evaluation of the effect of cold stress on physiological and biochemical traits of commerical sugarcane cultivar CP69-1062 with Saccharum spontaneum species in seedling stage

Environmental Stresses in Crop Sciences

Majedeh Neisi

Baratali Fakheri

Esmaeil Ebrahimie

Abbasali Emamjomeh

Javad Zahiri

...

2022/9/23

See List of Professors in Javad Zahiri University(University of California, San Diego)

Co-Authors

H-index: 48
saeid minaei

saeid minaei

Tarbiat Modares University

H-index: 29
Gerrit Polder

Gerrit Polder

Wageningen Universiteit

H-index: 28
Parviz Fattahi   (ORCID: 0000-0003-3039-2220)

Parviz Fattahi (ORCID: 0000-0003-3039-2220)

Alzahra University

H-index: 27
Reza H. Sajedi

Reza H. Sajedi

Tarbiat Modares University

H-index: 20
S. Shahriar Arab

S. Shahriar Arab

Tarbiat Modares University

H-index: 17
Abbas Nowzari-Dalini

Abbas Nowzari-Dalini

University of Tehran

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