Iddo Friedberg
Iowa State University
H-index: 32
North America-United States
Top articles of Iddo Friedberg
Title | Journal | Author(s) | Publication Date |
|---|---|---|---|
EpicTope: narrating protein sequence features to identify non-disruptive epitope tagging sites | bioRxiv | Joseph Zinski Henri Chung Parnal Joshi Finn Warrick Brian D Berg | 2024/3/6 |
CAFA-evaluator: A Python Tool for Benchmarking Ontological Classification Methods | Bioinformatics Advances | Damiano Piovesan Davide Zago Parnal Joshi M Clara De Paolis Kaluza Mahta Mehdiabadi | 2024/1/1 |
CAGI, the Critical Assessment of Genome Interpretation, establishes progress and prospects for computational genetic variant interpretation methods | Null Null Shantanu Jain Constantina Bakolitsa Steven E Brenner Predrag Radivojac | 2024 | |
Assembling bacterial puzzles: piecing together functions into microbial pathways | bioRxiv | Henri Chung Iddo Friedberg Yana Bromberg | 2024/3/27 |
An accurate and interpretable model for antimicrobial resistance in pathogenic Escherichia coli from livestock and companion animal species | PLoS One | Henri C Chung Christine L Foxx Jessica A Hicks Tod P Stuber Iddo Friedberg | 2023/8/24 |
GOThresher: a program to remove annotation biases from protein function annotation datasets | Bioinformatics | Parnal Joshi Sagnik Banerjee Xiao Hu Pranav M Khade Iddo Friedberg | 2023/1/1 |
Learning from the unknown: exploring the range of bacterial functionality | Nucleic Acids Research | Yannick Mahlich Chengsheng Zhu Henri Chung Pavan K Velaga M Clara De Paolis Kaluza | 2023/10/27 |
Characterizing domain-specific open educational resources by linking ISCB Communities of Special Interest to Wikipedia | Bioinformatics | Alastair M Kilpatrick Farzana Rahman Audra Anjum Sayane Shome KM Salim Andalib | 2022/7/1 |
Vertical transmission of attaching and invasive E. coli from the dam to neonatal mice predisposes to more severe colitis following exposure to a colitic insult later in … | Plos one | Meghan Wymore Brand Alexandra L Proctor Jesse M Hostetter Naihui Zhou Iddo Friedberg | 2022/4/5 |
A roadmap for the functional annotation of protein families: a community perspective | Database | Valérie de Crécy-Lagard Rocio Amorin de Hegedus Cecilia Arighi Jill Babor Alex Bateman | 2022/12/26 |
Discovering genomic islands in unannotated bacterial genomes using sequence embedding | bioRxiv | Priyanka Banerjee Oliver Eulenstein Iddo Friedberg | 2022/8/26 |
The field of protein function prediction as viewed by different domain scientists | Bioinformatics Advances | Rashika Ramola Iddo Friedberg Predrag Radivojac | 2022/8/17 |
Crowdsourcing biocuration: the Community Assessment of Community Annotation with Ontologies (CACAO) | PLoS computational biology | Jolene Ramsey Brenley McIntosh Daniel Renfro Suzanne A Aleksander Sandra LaBonte | 2021/10/28 |
Deploying MMEJ using MENdel in precision gene editing applications for gene therapy and functional genomics | Nucleic acids research | Gabriel Martínez-Gálvez Parnal Joshi Iddo Friedberg Armando Manduca Stephen C Ekker | 2021/1/11 |
Unraveling a tangled skein: evolutionary analysis of the bacterial gibberellin biosynthetic operon | Msphere | Ryan S Nett Huy Nguyen Raimund Nagel Ariana Marcassa Trevor C Charles | 2020/6/24 |
Transfer learning improves antibiotic resistance class prediction | Biorxiv | Md-Nafiz Hamid Iddo Friedberg | 2020/4/18 |
Establishing the reliability of algorithms | Lara Mangravite Sean D Mooney Iddo Friedberg Justin Guinney | 2020 | |
Finding orthologous gene blocks in bacteria: the computational hardness of the problem and novel methods to address it | Bioinformatics | Huy N Nguyen Alexey Markin Iddo Friedberg Oliver Eulenstein | 2020/12 |
Co-Authors
