Hong-Yu Ou
Shanghai Jiao Tong University
H-index: 39
Asia-China
Top articles of Hong-Yu Ou
Title | Journal | Author(s) | Publication Date |
|---|---|---|---|
Epitope-anchored contrastive transfer learning for paired CD8+ T cell receptor-antigen recognition | bioRxiv | Yumeng Zhang Zhikang Wang Yunzhe Jiang Dene R Littler Mark Gerstein | 2024 |
RES-Xre toxin-antitoxin locus knaAT maintains the stability of the virulence plasmid in Klebsiella pneumoniae | Emerging Microbes & Infections | Yongkui Chen Ying-Xian Goh Peifei Li Jiahao Guan Yanjie Chao | 2024/2/9 |
TADB 3.0: an updated database of bacterial toxin–antitoxin loci and associated mobile genetic elements | Nucleic Acids Research | Jiahao Guan Yongkui Chen Ying-Xian Goh Meng Wang Cui Tai | 2024/1/5 |
ICEberg 3.0: functional categorization and analysis of the integrative and conjugative elements in bacteria | Nucleic acids research | Meng Wang Guitian Liu Meng Liu Cui Tai Zixin Deng | 2024/1/5 |
Antibiotic-induced degradation of antitoxin enhances the transcription of acetyltransferase-type toxin-antitoxin operon | Journal of Antimicrobial Chemotherapy | Peifei Li Ying-Xian Goh Bojana Ilic Cui Tai Zixin Deng | 2023/4/4 |
SecReT6 update: a comprehensive resource of bacterial type VI secretion systems | Science China Life Sciences | Jianfeng Zhang Jiahao Guan Meng Wang Gang Li Marko Djordjevic | 2023/3 |
CpxR promotes the carbapenem antibiotic resistance of Klebsiella pneumoniae by directly regulating the expression and the dissemination of blaKPC on the … | Emerging Microbes & Infections | Zhiyuan Liu Jiahao Guan Zhaoyan Chen Cui Tai Zixin Deng | 2023/12/8 |
Mobilizable plasmids drive the spread of antimicrobial resistance genes and virulence genes in Klebsiella pneumoniae | Genome Medicine | Jianfeng Zhang Yanping Xu Meng Wang Xiaobin Li Zhiyuan Liu | 2023/12/1 |
DeepSecE: a deep-learning-based Framework for multiclass Prediction of secreted Proteins in gram-negative bacteria | Research | Yumeng Zhang Jiahao Guan Chen Li Zhikang Wang Zixin Deng | 2023/10/25 |
Analysis of CRISPR-Cas Loci and their Targets in Levilactobacillus brevis | Interdisciplinary Sciences: Computational Life Sciences | Ying-Xian Goh Meng Wang Xiao-Ping Hou Yang He Hong-Yu Ou | 2023/9 |
Identification and characterization of a central replication origin of the mega-plasmid pSCATT of Streptomyces cattleya | Microbiological Research | Peng Li Jinqi Zhang Zixin Deng Feng Gao Hong-Yu Ou | 2022/4/1 |
Identification of Type II Toxin-Antitoxin Loci in Levilactobacillus brevis | Interdisciplinary Sciences: Computational Life Sciences | Ying-Xian Goh Yang He Hong-Yu Ou | 2022/3/1 |
ICEO, a biological ontology for representing and analyzing bacterial integrative and conjugative elements | Scientific Data | Meng Liu Jialin Liu Guitian Liu Hui Wang Xiaoli Wang | 2022/1/20 |
Transmission of nonconjugative virulence or resistance plasmids mediated by a self-transferable IncN3 plasmid from carbapenem-resistant Klebsiella pneumoniae | Microbiology spectrum | Xiaoli Wang Bin Tang Guitian Liu Meng Wang Jingyong Sun | 2022/8/31 |
T4SEfinder: a bioinformatics tool for genome-scale prediction of bacterial type IV secreted effectors using pre-trained protein language model | Briefings in Bioinformatics | Yumeng Zhang Yangming Zhang Yi Xiong Hui Wang Zixin Deng | 2022/1 |
Comparative analysis of diverse acetyltransferase-type toxin-antitoxin loci in Klebsiella pneumoniae | Microbiology spectrum | Ying-Xian Goh Peifei Li Meng Wang Marko Djordjevic Cui Tai | 2022/8/31 |
VRprofile2: detection of antibiotic resistance-associated mobilome in bacterial pathogens | Nucleic acids research | Meng Wang Ying-Xian Goh Cui Tai Hui Wang Zixin Deng | 2022/7/5 |
Mobilization of the nonconjugative virulence plasmid from hypervirulent Klebsiella pneumoniae | Genome Medicine | Yanping Xu Jianfeng Zhang Meng Wang Meng Liu Guitian Liu | 2021/12 |
Bacterial YedK represses plasmid DNA replication and transformation through its DNA single-strand binding activity | Microbiological Research | Wenyue Hu Yuli Wang Bingxu Yang Chen Lin Hao Yu | 2021/11/1 |
Heterogeneous Klebsiella pneumoniae Co-infections Complicate Personalized Bacteriophage Therapy | Frontiers in cellular and infection microbiology | Jinhong Qin Nannan Wu Juan Bao Xin Shi Hongyu Ou | 2021/1/25 |
