Harmen van de Werken

About Harmen van de Werken

Harmen van de Werken, With an exceptional h-index of 37 and a recent h-index of 31 (since 2020), a distinguished researcher at Erasmus Universiteit Rotterdam, specializes in the field of Bioinformatics, Computational Biology, 3D-genome, Cancer, Immunogenomics.

His recent articles reflect a diverse array of research interests and contributions to the field:

Runx1+ vascular smooth muscle cells are essential for hematopoietic stem and progenitor cell development in vivo

TLR9 plus STING Agonist Adjuvant Combination Induces Potent Neopeptide T Cell Immunity and Improves Immune Checkpoint Blockade Efficacy in a Tumor Model

Whole-genome mapping of APOBEC mutagenesis in metastatic urothelial carcinoma identifies driver hotspot mutations and a novel mutational signature

Identification of unique liver NK cells in HBV and a new perspective on exhaustion-related NK cell phenotypes by single-cell RNA sequencing

Ibrutinib directly reduces CD8+ T cell exhaustion independent of BTK

Evaluation of pre-processing methods for tear fluid proteomics using proximity extension assays

Personalised decision making to predict absolute metastatic risk in cutaneous squamous cell carcinoma: development and validation of a clinico-pathological model

Identifying somatic changes in drug transporters using whole genome and transcriptome sequencing data of advanced tumors

Harmen van de Werken Information

University

Position

Cancer Computational Biology Center (CCBC) and the Departments of Immunology and Urology, Erasmus MC

Citations(all)

6369

Citations(since 2020)

3457

Cited By

4339

hIndex(all)

37

hIndex(since 2020)

31

i10Index(all)

55

i10Index(since 2020)

50

Email

University Profile Page

Google Scholar

Harmen van de Werken Skills & Research Interests

Bioinformatics

Computational Biology

3D-genome

Cancer

Immunogenomics

Top articles of Harmen van de Werken

Title

Journal

Author(s)

Publication Date

Runx1+ vascular smooth muscle cells are essential for hematopoietic stem and progenitor cell development in vivo

Nature Communications

Zaniah N Gonzalez Galofre

Alastair M Kilpatrick

Madalena Marques

Diana Sá da Bandeira

Telma Ventura

...

2024/2/23

TLR9 plus STING Agonist Adjuvant Combination Induces Potent Neopeptide T Cell Immunity and Improves Immune Checkpoint Blockade Efficacy in a Tumor Model

The Journal of Immunology

Melisa D Castro Eiro

Kou Hioki

Ling Li

Merel EP Wilmsen

Caoimhe H Kiernan

...

2024/2/1

Whole-genome mapping of APOBEC mutagenesis in metastatic urothelial carcinoma identifies driver hotspot mutations and a novel mutational signature

Cell Genomics

J Alberto Nakauma-González

Maud Rijnders

Minouk TW Noordsij

John WM Martens

Astrid AM van der Veldt

...

2023

Identification of unique liver NK cells in HBV and a new perspective on exhaustion-related NK cell phenotypes by single-cell RNA sequencing

Journal of Hepatology

Boris Beudeker

Arda Karaoglu

Gertine Oord

Anthony Grooshuismink

Noé Axel Montanari

...

2023/6/1

Ibrutinib directly reduces CD8+ T cell exhaustion independent of BTK

Frontiers in Immunology

Ling Li

Manzhi Zhao

Caoimhe H Kiernan

Melisa D Castro Eiro

Marjan van Meurs

...

2023/9/12

Evaluation of pre-processing methods for tear fluid proteomics using proximity extension assays

Scientific Reports

Daphne PC Vergouwen

Amber J Schotting

Tanja Endermann

Harmen JG van de Werken

Dwin GB Grashof

...

2023/3/17

Personalised decision making to predict absolute metastatic risk in cutaneous squamous cell carcinoma: development and validation of a clinico-pathological model

EClinicalMedicine

Barbara Rentroia-Pacheco

Selin Tokez

Edo M Bramer

Zoe C Venables

Harmen JG van de Werken

...

2023/9/1

Identifying somatic changes in drug transporters using whole genome and transcriptome sequencing data of advanced tumors

Biomedicine and Pharmacotherapy

Wesley S van de Geer

Ron HJ Mathijssen

Job van Riet

Neeltje Steeghs

Mariette Labots

...

2023/3/1

P318: LOSS OF SCARNA12 RESULTS IN ABERRANT SPLICING OF TARGET GENES AND DOWNREGULATION OF P53 IN B-CELL PRECURSOR ACUTE LYMPHOBLASTIC LEUKEMIA (BCP-ALL)

HemaSphere

Martijn Verbeek

Mathijs Sanders

Dwin Grashof

Harmen Van De Werken

Iris Van Zuijen

...

2023/8/1

Association of HBsAg levels with differential gene expression in NK, CD8 T, and memory B cells in treated patients with chronic HBV

JHEP Reports

Boris JB Beudeker

Zgjim Osmani

Gertine W van Oord

Zwier MA Groothuismink

Robert J de Knegt

...

2023/12/3

Katdetectr: an R/bioconductor package utilizing unsupervised changepoint analysis for robust kataegis detection

GigaScience

Daan M Hazelaar

Job van Riet

Youri Hoogstrate

Harmen JG van de Werken

2023

Classification of Inflammation of Unknown Origin patients based on RNA-seq and SomaScan data

Orestis D Papagiannopoulos

Konstantina Kourou

Costas Papaloukas

Georgia S Karanasiou

Harmen JG van de Werken

...

2023/7/24

Single-cell RNA sequencing of liver fine-needle aspirates captures immune diversity in the blood and liver in chronic hepatitis B patients

Hepatology

Alex S Genshaft

Sonu Subudhi

Arlin Keo

Juan Diego Sanchez Vasquez

Nádia Conceição-Neto

...

2023/5/10

The genomic and transcriptomic landscape of advanced renal cell cancer for individualized treatment strategies

Scientific reports

K de Joode

WS van de Geer

GJLH van Leenders

P Hamberg

HM Westgeest

...

2023/7/3

Overcoming immune checkpoint blockade resistance in solid tumors with intermittent ITK inhibition

Scientific Reports

Manzhi Zhao

Ling Li

Caoimhe H Kiernan

Melisa D Castro Eiro

Floris Dammeijer

...

2023/9/21

The EGFRvIII transcriptome in glioblastoma: A meta-omics analysis

Neuro-oncology

Youri Hoogstrate

Santoesha A Ghisai

Maurice de Wit

Iris de Heer

Kaspar Draaisma

...

2022/3/1

PDGFRβ+ cells play a dual role as hematopoietic precursors and niche cells during mouse ontogeny

Cell reports

Diana Sá da Bandeira

Alastair Morris Kilpatrick

Madalena Marques

Mario Gomez-Salazar

Telma Ventura

...

2022/7/19

Comparison of Proteomic Approaches in Autoinflammatory Disease Classification

Orestis D Papagiannopoulos

Costas Papaloukas

Vasileios C Pezoulas

Harmen JG Van de Werken

Christophe Poulet

...

2022/9/27

Stratification of hospitalized COVID-19 patients into clinical severity progression groups by immuno-phenotyping and machine learning

Nature communications

Yvonne M Mueller

Thijs J Schrama

Rik Ruijten

Marco WJ Schreurs

Dwin GB Grashof

...

2022/2/17

Trained immunity in primary sjögren’s syndrome: linking type I interferons to a pro-atherogenic phenotype

Frontiers in Immunology

Erika Huijser

Cornelia G van Helden-Meeuwsen

Dwin GB Grashof

Jessica R Tarn

Zana Brkic

...

2022/7/4

See List of Professors in Harmen van de Werken University(Erasmus Universiteit Rotterdam)

Co-Authors

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