Giulia Guidi
University of California, Berkeley
H-index: 8
North America-United States
Top articles of Giulia Guidi
Title | Journal | Author(s) | Publication Date |
|---|---|---|---|
Space Efficient Sequence Alignment for SRAM-Based Computing: X-Drop on the Graphcore IPU | Luk Burchard Max Xiaohang Zhao Johannes Langguth Aydın Buluç Giulia Guidi | 2023/11/12 | |
Extreme-scale many-against-many protein similarity search | Oguz Selvitopi Saliya Ekanayakey Giulia Guidiz Muaaz G Awanx Georgios A Pavlopoulos | 2022/11/3 | |
Distributed-Memory Parallel Contig Generation for De Novo Long-Read Genome Assembly | Giulia Guidi Gabriel Raulet Daniel Rokhsar Leonid Oliker Katherine Yelick | 2022/8/29 | |
Parallel Algorithms for De Novo Long Read Genome Assembly via Sparse Linear Algebra | Giulia Guidi | 2022 | |
10 years later: cloud computing is closing the performance gap | Giulia Guidi Marquita Ellis Aydin Buluç Katherine Yelick David Culler | 2021/4/19 | |
BELLA: Berkeley efficient long-read to long-read aligner and overlapper | Giulia Guidi Marquita Ellis Daniel Rokhsar Katherine Yelick Aydın Buluç | 2021 | |
BuDDI: A Declarative Bloom Language for CALM Programming | arXiv preprint arXiv:2109.08192 | Rolando Garcia Giulia Guidi | 2021/9/16 |
Parallel string graph construction and transitive reduction for de novo genome assembly | Giulia Guidi Oguz Selvitopi Marquita Ellis Leonid Oliker Katherine Yelick | 2021/5/17 | |
Distributed many-to-many protein sequence alignment using sparse matrices | Oguz Selvitopi Saliya Ekanayake Giulia Guidi Georgios A Pavlopoulos Ariful Azad | 2020/11/9 | |
Logan: High-performance gpu-based x-drop long-read alignment | Alberto Zeni Giulia Guidi Marquita Ellis Nan Ding Marco D Santambrogio | 2020/5/18 | |
The parallelism motifs of genomic data analysis | Philosophical Transactions of the Royal Society A | Katherine Yelick Aydın Buluç Muaaz Awan Ariful Azad Benjamin Brock | 2020/3/6 |
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