Diwakar Shukla

Diwakar Shukla

University of Illinois at Urbana-Champaign

H-index: 35

North America-United States

About Diwakar Shukla

Diwakar Shukla, With an exceptional h-index of 35 and a recent h-index of 28 (since 2020), a distinguished researcher at University of Illinois at Urbana-Champaign, specializes in the field of Chemical Engineering, Physical Chemistry, Biophysics, Computational Biology.

His recent articles reflect a diverse array of research interests and contributions to the field:

Contribution of Signaling Partner Association to Strigolactone Receptor Selectivity

Functional regulation of aquaporin dynamics by lipid bilayer composition

Binding Position Dependent Modulation of Smoothened Activity by Cyclopamine

Substrate Prediction for RiPP Biosynthetic Enzymes via Masked Language Modeling and Transfer Learning

Leveraging machine learning models for peptide–protein interaction prediction

How do lasso peptides fold?

Challenges and opportunities in machine learning-guided plant protein engineering

Engineering selectivity of sweet family transporters using deep mutational scanning

Diwakar Shukla Information

University

Position

Assistant Professor

Citations(all)

5099

Citations(since 2020)

2911

Cited By

3356

hIndex(all)

35

hIndex(since 2020)

28

i10Index(all)

76

i10Index(since 2020)

65

Email

University Profile Page

University of Illinois at Urbana-Champaign

Google Scholar

View Google Scholar Profile

Diwakar Shukla Skills & Research Interests

Chemical Engineering

Physical Chemistry

Biophysics

Computational Biology

Top articles of Diwakar Shukla

Title

Journal

Author(s)

Publication Date

Contribution of Signaling Partner Association to Strigolactone Receptor Selectivity

The Journal of Physical Chemistry B

Jiming Chen

Tanner J Dean

Diwakar Shukla

2024/1/9

Functional regulation of aquaporin dynamics by lipid bilayer composition

Nature Communications

Anh TP Nguyen

Austin T Weigle

Diwakar Shukla

2024/2/28

Binding Position Dependent Modulation of Smoothened Activity by Cyclopamine

bioRxiv

Kihong Kim

Prateek D Bansal

Diwakar Shukla

2024

Substrate Prediction for RiPP Biosynthetic Enzymes via Masked Language Modeling and Transfer Learning

arXiv preprint arXiv:2402.15181

Joseph D Clark

Xuenan Mi

Douglas A Mitchell

Diwakar Shukla

2024/2/23

Leveraging machine learning models for peptide–protein interaction prediction

Song Yin

Xuenan Mi

Diwakar Shukla

2024

How do lasso peptides fold?

Biophysical Journal

Xuenan Mi

Diwakar Shukla

2024/2/8

Challenges and opportunities in machine learning-guided plant protein engineering

Diwakar Shukla

2024/2/8

Engineering selectivity of sweet family transporters using deep mutational scanning

Biophysical Journal

Lingyun Xu

Diwakar Shukla

2024/2/8

Structure-function analysis of plant G-protein regulatory mechanisms identifies key Gα-RGS protein interactions

Journal of Biological Chemistry

Maria Daniela Torres-Rodriguez

Soon Goo Lee

Swarup Roy Choudhury

Rabindranath Paul

Balaji Selvam

...

2024/5/1

Active learning of the conformational ensemble of proteins using maximum entropy VAMPNets

Journal of Chemical Theory and Computation

Diego E Kleiman

Diwakar Shukla

2023/4/7

Sequence basis for selectivity of ephrin-B2 ligand for Eph receptors and pathogenic henipavirus G glycoproteins

Journal of virology

Krishna K Narayanan

Moushimi Amaya

Natalie Tsang

Randy Yin

Alka Jays

...

2023/11/30

Reconciling membrane protein simulations with experimental DEER spectroscopy data

Physical Chemistry Chemical Physics

Shriyaa Mittal

Soumajit Dutta

Diwakar Shukla

2023

Machine Learning Guided Design of High-Affinity ACE2 Decoys for SARS-CoV-2 Neutralization

The Journal of Physical Chemistry B

Matthew C Chan

Kui K Chan

Erik Procko

Diwakar Shukla

2023/2/24

The effects of n-linked glycosylation on slc6 transporters

Journal of Chemical Information and Modeling

Matthew C Chan

Diwakar Shukla

2023/4/7

Transition-based reweighting and neural rational inference analysis of effects of new psychoactive substances on cannabinoid receptors

bioRxiv

Soumajit Dutta

Diwakar Shukla

2023/10/2

Mechanism of the cholesterol transport in smoothened

Biophysical Journal

Prateek D Bansal

Diwakar Shukla

2023/2/10

Effect of histidine covalent modification on strigolactone receptor activation and selectivity

Biophysical journal

Jiming Chen

Diwakar Shukla

2023/4/4

The Experimentalist’s Guide to Machine Learning for Small Molecule Design

Sarah E Lindley

Yiyang Lu

Diwakar Shukla

2023/8/3

Mechanistic Basis for Enhanced Strigolactone Sensitivity in KAI2 Triple Mutant

bioRxiv

Briana L Sobecks

Jiming Chen

Diwakar Shukla

2023/1/20

Activation mechanism of the human Smoothened receptor

Biophysical journal

Prateek D Bansal

Soumajit Dutta

Diwakar Shukla

2023/4/4

See List of Professors in Diwakar Shukla University(University of Illinois at Urbana-Champaign)

Co-Authors

H-index: 136
Benoit Roux

Benoit Roux

University of Chicago

H-index: 118
Russ B Altman

Russ B Altman

Stanford University

H-index: 117
Vijay Pande

Vijay Pande

Stanford University

H-index: 49
Michael R. Shirts

Michael R. Shirts

University of Colorado Boulder

H-index: 36
Lee-Ping Wang

Lee-Ping Wang

University of California, Davis

H-index: 29
Erik Procko

Erik Procko

University of Illinois at Urbana-Champaign

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