Denis Schapiro
Harvard University
H-index: 22
North America-United States
Top articles of Denis Schapiro
Title | Journal | Author(s) | Publication Date |
|---|---|---|---|
Harmonizing the Generation and Pre-publication Stewardship of FAIR Image data | arXiv preprint arXiv:2401.13022 | Nikki Bialy Frank Alber Brenda Andrews Michael Angelo Brian Beliveau | 2024/1/23 |
Integrative multi-omics identifies regulatory and exhausted T cell types and novel immunotherapy targets in CLL lymph nodes | Martina Seiffert Laura Llaó Cid John Wong Alessia Floerchinger Yashna Paul | 2024/3/29 | |
Transcriptional dynamics of the murine heart during perinatal development at single-cell resolution | bioRxiv | Lara Feulner Florian Wünnemann Jenna Liang Philipp Hofmann Marc-Phillip Hitz | 2024/3/10 |
In silico tissue generation and power analysis for spatial omics | Nature Methods | Ethan AG Baker Denis Schapiro Bianca Dumitrascu Sanja Vickovic Aviv Regev | 2023/3 |
T cell landscape definition by multi-omics identifies Galectin-9 as novel immunotherapy target in chronic lymphocytic leukemia | bioRxiv | L Llaó Cid JKL Wong I Fernandez Botana Y Paul M Wierz | 2022/12/16 |
Stepwise-edited, human melanoma models reveal mutations’ effect on tumor and microenvironment | Science | Eran Hodis Elena Torlai Triglia John YH Kwon Tommaso Biancalani Labib R Zakka | 2022/4/29 |
A Web-based Software Resource for Interactive Analysis of Multiplex Tissue Imaging Datasets | BioRxiv | Allison Creason Cameron Watson Qiang Gu Daniel Persson Luke Sargent | 2022/8/19 |
Spatial intra-tumor heterogeneity is associated with survival of lung adenocarcinoma patients | Cell genomics | Hua-Jun Wu Daniel Temko Zoltan Maliga Andre L Moreira Emi Sei | 2022/8/10 |
Explainable multiview framework for dissecting spatial relationships from highly multiplexed data | Genome biology | Jovan Tanevski Ricardo Omar Ramirez Flores Attila Gabor Denis Schapiro Julio Saez-Rodriguez | 2022/4/14 |
Single-nucleus and spatial transcriptome profiling of pancreatic cancer identifies multicellular dynamics associated with neoadjuvant treatment | Nature genetics | William L Hwang Karthik A Jagadeesh Jimmy A Guo Hannah I Hoffman Payman Yadollahpour | 2022/8 |
MITI minimum information guidelines for highly multiplexed tissue images | Nature methods | Denis Schapiro Clarence Yapp Artem Sokolov Sheila M Reynolds Yu-An Chen | 2022/3 |
High-dimensional single-cell definition of CLL T cells identifies Galectin-9 as novel immunotherapy target | J Wong Fernandez Botana Y Paul M Wierz A Flörchinger | 2022/12/16 | |
MCMICRO: a scalable, modular image-processing pipeline for multiplexed tissue imaging | Nature methods | Denis Schapiro Artem Sokolov Clarence Yapp Yu-An Chen Jeremy L Muhlich | 2022/3 |
Dissecting the treatment-naive ecosystem of human melanoma brain metastasis | Cell | Jana Biermann Johannes C Melms Amit Dipak Amin Yiping Wang Lindsay A Caprio | 2022/7/7 |
Spatial cell type mapping of multiple sclerosis lesions | bioRxiv | Celia Lerma-Martin Pau Badia-i-Mompel Ricardo O Ramirez Flores Patricia Sekol Annika Hofmann | 2022/11/3 |
Three-dimensional spatial transcriptomics uncovers cell type localizations in the human rheumatoid arthritis synovium | Communications Biology | Sanja Vickovic Denis Schapiro Konstantin Carlberg Britta Lötstedt Ludvig Larsson | 2022/2/11 |
Curating cartography: Enabling the harmonisation, visualisation, and reuse of diverse multiplexed imaging data through the Human Tumor Atlas Network Data Coordinating Center | Cancer Research | Adam J Taylor Milen Nikolov Ino de Brujin Jeremy Muhlich Mialy De Felice | 2022/6/15 |
Spatial multi-omic map of human myocardial infarction | Nature | Christoph Kuppe Ricardo O Ramirez Flores Zhijian Li Sikander Hayat Rebecca T Levinson | 2022/8/25 |
MIAAIM: Multi-omics image integration and tissue state mapping using topological data analysis and cobordism learning | bioRxiv | Joshua M Hess Iulian Ilieş Denis Schapiro John J Iskra Walid M Abdelmoula | 2021/12/21 |
Multi-compartment reprogramming and spatially-resolved interactions in frozen pancreatic cancer with and without neoadjuvant chemotherapy and radiotherapy at single-cell resolution | Cancer Research | William L Hwang Karthik A Jagadeesh Jimmy A Guo Hannah I Hoffman Payman Yadollahpour | 2021/7/1 |
Co-Authors
