David van Dijk

David van Dijk

Yale University

H-index: 34

North America-United States

About David van Dijk

David van Dijk, With an exceptional h-index of 34 and a recent h-index of 31 (since 2020), a distinguished researcher at Yale University, specializes in the field of machine learning, computational biology.

His recent articles reflect a diverse array of research interests and contributions to the field:

Longitudinal single-cell transcriptional dynamics throughout neurodegeneration in SCA1

Sex differences in symptomatology and immune profiles of Long COVID

Causal identification of single-cell experimental perturbation effects with CINEMA-OT

Continuous spatiotemporal transformer

Operator Learning Meets Numerical Analysis: Improving Neural Networks through Iterative Methods

Anatomical Diversity of the Adult Corticospinal Tract Revealed by Single-Cell Transcriptional Profiling

The Code To Change: Empowering Marginalised Groups Through Technology

Cell2sentence: Teaching large language models the language of biology

David van Dijk Information

University

Position

Assistant Professor

Citations(all)

7294

Citations(since 2020)

6661

Cited By

1823

hIndex(all)

34

hIndex(since 2020)

31

i10Index(all)

55

i10Index(since 2020)

52

Email

University Profile Page

Google Scholar

David van Dijk Skills & Research Interests

machine learning

computational biology

Top articles of David van Dijk

Title

Journal

Author(s)

Publication Date

Longitudinal single-cell transcriptional dynamics throughout neurodegeneration in SCA1

Neuron

Leon Tejwani

Neal G Ravindra

Changwoo Lee

Yubao Cheng

Billy Nguyen

...

2024/2/7

Sex differences in symptomatology and immune profiles of Long COVID

medRxiv

Julio Silva

Takehiro Takahashi

Jamie Wood

Peiwen Lu

Alexandra Tabachnikova

...

2024/3/2

Causal identification of single-cell experimental perturbation effects with CINEMA-OT

Nature Methods

Mingze Dong

Bao Wang

Jessica Wei

Antonio H de O. Fonseca

Curtis J Perry

...

2023/11

Continuous spatiotemporal transformer

Antonio Henrique de Oliveira Fonseca

Emanuele Zappala

Josue Ortega Caro

David Van Dijk

2023/6/15

Operator Learning Meets Numerical Analysis: Improving Neural Networks through Iterative Methods

arXiv preprint arXiv:2310.01618

Emanuele Zappala

Daniel Levine

Sizhuang He

Syed Rizvi

Sacha Levy

...

2023/10/2

Anatomical Diversity of the Adult Corticospinal Tract Revealed by Single-Cell Transcriptional Profiling

Journal of Neuroscience

Noa Golan

Daniel Ehrlich

James Bonanno

Rory F O'Brien

Matias Murillo

...

2023/11/22

The Code To Change: Empowering Marginalised Groups Through Technology

Daily van Dijk

2023/6/1

Cell2sentence: Teaching large language models the language of biology

bioRxiv

Daniel Levine

Sacha Lévy

Syed Asad Rizvi

Nazreen Pallikkavaliyaveetil

Xingyu Chen

...

2023/9/14

A machine learning method for the identification and characterization of novel COVID-19 drug targets

Scientific Reports

Bruce Schultz

Lauren Nicole DeLong

Aliaksandr Masny

Manuel Lentzen

Tamara Raschka

...

2023/5/3

BrainLM: A foundation model for brain activity recordings

bioRxiv

Josue Ortega Caro

Antonio Henrique Oliveira Fonseca

Christopher Averill

Syed A Rizvi

Matteo Rosati

...

2023/9/13

Continuous spatiotemporal transformers

arXiv preprint arXiv:2301.13338

Antonio H de O Fonseca

Emanuele Zappala

Josue Ortega Caro

David Van Dijk

2023/1/31

Distinguishing features of Long COVID identified through immune profiling

Nature

Jon Klein

Jamie Wood

Jillian R Jaycox

Rahul M Dhodapkar

Peiwen Lu

...

2023/11/2

Neural integro-differential equations

Proceedings of the AAAI Conference on Artificial Intelligence

Emanuele Zappala

Antonio H de O Fonseca

Andrew H Moberly

Michael J Higley

Chadi Abdallah

...

2023/6/26

scNAT: a deep learning method for integrating paired single-cell RNA and T cell receptor sequencing profiles

Genome Biology

Biqing Zhu

Yuge Wang

Li-Ting Ku

David van Dijk

Le Zhang

...

2023/12/18

Nasal host response-based screening for undiagnosed respiratory viruses: a pathogen surveillance and detection study

The Lancet Microbe

Nagarjuna R Cheemarla

Amelia Hanron

Joseph R Fauver

Jason Bishai

Timothy A Watkins

...

2023/1/1

AMPNet: Attention as Message Passing for Graph Neural Networks

arXiv preprint arXiv:2210.09475

Syed Asad Rizvi

Nhi Nguyen

Haoran Lyu

Benjamin Christensen

Josue Ortega Caro

...

2022/10/17

Single-cell multi-omics reveals dyssynchrony of the innate and adaptive immune system in progressive COVID-19

Nature communications

Avraham Unterman

Tomokazu S Sumida

Nima Nouri

Xiting Yan

Amy Y Zhao

...

2022/1/21

Neural integral equations

arXiv preprint arXiv:2209.15190

Emanuele Zappala

Antonio Henrique de Oliveira Fonseca

Josue Ortega Caro

David van Dijk

2022/9/30

Interspecies commensal interactions have nonlinear impacts on host immunity

Cell host & microbe

Tyler A Rice

Agata A Bielecka

Mytien T Nguyen

Connor E Rosen

Deguang Song

...

2022/7/13

Single-cell multiomics reveals persistence of HIV-1 in expanded cytotoxic T cell clones

Immunity

Jack A Collora

Runxia Liu

Delia Pinto-Santini

Neal Ravindra

Carmela Ganoza

...

2022/6/14

See List of Professors in David van Dijk University(Yale University)

Co-Authors

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