David Sankoff

David Sankoff

Ottawa University

H-index: 79

North America-United States

About David Sankoff

David Sankoff, With an exceptional h-index of 79 and a recent h-index of 39 (since 2020), a distinguished researcher at Ottawa University, specializes in the field of Applied probability, bioinformatics, genomics, algorithms.

His recent articles reflect a diverse array of research interests and contributions to the field:

The genome and population genomics of allopolyploid Coffea arabica reveal the diversification history of modern coffee cultivars

A minimal model of boosting and waning iin a recurrent seasonal epidemic

Sampling Gene Adjacencies and Geodesic Points of Random Genomes

Capacity, Collision Avoidance and Shopping Rate under a Social Distancing Regime

Gene order phylogeny via ancestral genome reconstruction under dollo

From comparative gene content and gene order to ancestral contigs, chromosomes and karyotypes

Escape from parsimony of a double-cut-and-join genome evolution process

Syntenic Dimensions of Genomic Evolution

David Sankoff Information

University

Position

___

Citations(all)

36009

Citations(since 2020)

6792

Cited By

30690

hIndex(all)

79

hIndex(since 2020)

39

i10Index(all)

270

i10Index(since 2020)

94

Email

University Profile Page

Ottawa University

Google Scholar

View Google Scholar Profile

David Sankoff Skills & Research Interests

Applied probability

bioinformatics

genomics

algorithms

Top articles of David Sankoff

Title

Journal

Author(s)

Publication Date

The genome and population genomics of allopolyploid Coffea arabica reveal the diversification history of modern coffee cultivars

bioRxiv

Jarkko Salojärvi

Aditi Rambani

Zhe Yu

Romain Guyot

Susan Strickler

...

2023/9/6

A minimal model of boosting and waning iin a recurrent seasonal epidemic

arXiv preprint arXiv:2404.12865

Siyu Chen

David Sankoff

2024/4/19

Sampling Gene Adjacencies and Geodesic Points of Random Genomes

Poly H da Silva

Arash Jamshidpey

David Sankoff

2024/4/15

Capacity, Collision Avoidance and Shopping Rate under a Social Distancing Regime

Entropy

Haitian Zhong

David Sankoff

2023/12/17

Gene order phylogeny via ancestral genome reconstruction under dollo

Qiaoji Xu

David Sankoff

2023/4/14

From comparative gene content and gene order to ancestral contigs, chromosomes and karyotypes

Scientific Reports

Qiaoji Xu

Lingling Jin

Chunfang Zheng

Xiaomeng Zhang

James Leebens-Mack

...

2023/4/13

Escape from parsimony of a double-cut-and-join genome evolution process

Journal of Computational Biology

Mona Meghdari Miardan

Arash Jamshidpey

David Sankoff

2023/2/1

Syntenic Dimensions of Genomic Evolution

Zhe Yu

David Sankoff

2022/5/15

Buxus and Tetracentron genomes help resolve eudicot genome history

Nature communications

Andre S Chanderbali

Lingling Jin

Qiaoji Xu

Yue Zhang

Jingbo Zhang

...

2022/2/2

Peripheral structures in unlabelled trees and the accumulation of subgenomes in the evolution of polyploids

Journal of Theoretical Biology

Fatemeh Pouryahya

David Sankoff

2022/1/7

Two divergent haplotypes from a highly heterozygous lychee genome suggest independent domestication events for early and late-maturing cultivars

Nature genetics

Guibing Hu

Junting Feng

Xu Xiang

Jiabao Wang

Jarkko Salojärvi

...

2022/1

Genome sequence and evolution of Betula platyphylla

Horticulture research

Su Chen

Yucheng Wang

Lili Yu

Tao Zheng

Sui Wang

...

2021/12/1

The contributions from the progenitor genomes of the mesopolyploid Brassiceae are evolutionarily distinct but functionally compatible

Genome research

Yue Hao

Makenzie E Mabry

Patrick P Edger

Michael Freeling

Chunfang Zheng

...

2021/5/1

Guest Editorial for the 17th Asia Pacific Bioinformatics Conference

IEEE/ACM Transactions on Computational Biology and Bioinformatics

Louxin Zhang

Shaoliang Peng

Yi-Ping Phoebe Chen

David Sankoff

Guoliang Li

...

2021/11/1

Ancestral flowering plant chromosomes and gene orders based on generalized adjacencies and chromosomal gene co-occurrences

Journal of Computational Biology

Qiaoji Xu

Lingling Jin

Yue Zhang

Xiaomeng Zhang

Chunfang Zheng

...

2021/11/1

Appendix B: The contributions from the progenitor genomes of the mesopolyploid Brassiceae are evolutionarily distinct but functionally compatible

THE POWER OF SYNTENY: DEEP EVOLUTIONARY INSIGHTS FROM COMPARATIVE GENOMICS

Yue Hao

Makenzie E Mabry

Patrick P Edger

Michael Freeling

Chunfang Zheng

...

2021/7

Integrated synteny-and similarity-based inference on the polyploidization–fractionation cycle

Interface Focus

Yue Zhang

Zhe Yu

Chunfang Zheng

David Sankoff

2021/6/11

The monoploid chromosome complement of reconstructed ancestral genomes in a phylogeny

Journal of Bioinformatics and Computational Biology

Qiaoji Xu

Xiaomeng Zhang

Yue Zhang

Chunfang Zheng

James H Leebens-Mack

...

2021/12/19

Validation of automated chromosome recovery in the reconstruction of ancestral gene order

Algorithms

Qiaoji Xu

Lingling Jin

James H Leebens-Mack

David Sankoff

2021/5/21

Gaps and runs in syntenic alignments

Zhe Yu

Chunfang Zheng

David Sankoff

2020

See List of Professors in David Sankoff University(Ottawa University)

Co-Authors

H-index: 155
Doug Soltis

Doug Soltis

University of Florida

H-index: 89
Michael W. Gray

Michael W. Gray

Dalhousie University

H-index: 88
Claude dePamphilis

Claude dePamphilis

Penn State University

H-index: 77
Jim Leebens-Mack

Jim Leebens-Mack

University of Georgia

H-index: 77
B. Franz Lang

B. Franz Lang

Université de Montréal

H-index: 58
Shana Poplack

Shana Poplack

University of Ottawa

academic-engine