Daniel Rigden
University of Liverpool
H-index: 63
Europe-United Kingdom
Top articles of Daniel Rigden
Title | Journal | Author(s) | Publication Date |
|---|---|---|---|
m6A-Atlas v2.0: updated resources for unraveling the N6-methyladenosine (m6A) epitranscriptome among multiple species | Nucleic Acids Research | Zhanmin Liang Haokai Ye Jiongming Ma Zhen Wei Yue Wang | 2024/1/5 |
Deep-learning protein structure predictions suggest likely molecular functions for three uncharacterised polytopic membrane proteins from the P. falciparum apicoplast | bioRxiv | David L Murphy Shahram Mesdaghi Filomeno Sanchez Rodriguez Adam J Simpkin Daniel J Rigden | 2024 |
m6ACali: machine learning-powered calibration for accurate m6A detection in MeRIP-Seq | Nucleic acids research | Haokai Ye Tenglong Li Daniel J Rigden Zhen Wei | 2024/4/18 |
KH-like Domains in PARP9/DTX3L and PARP14 Coordinate Protein–Protein Interactions to Promote Cancer Cell Survival | Journal of molecular biology | Hadil Saleh Triantafillos Liloglou Daniel J Rigden Jason L Parsons Gabrielle J Grundy | 2024/2/15 |
Microtubule association of TRIM3 revealed by differential extraction proteomics | Journal of cell science | Hannah L Glover Marta Mendes Joana Gomes-Neto Emma V Rusilowicz-Jones Daniel J Rigden | 2024/1/15 |
m7GHub V2.0: an updated database for decoding the N7-methylguanosine (m7G) epitranscriptome | Nucleic Acids Research | Xuan Wang Yuxin Zhang Kunqi Chen Zhanmin Liang Jiongming Ma | 2024/1/5 |
The CCP4 suite: integrative software for macromolecular crystallography | Acta Crystallographica Section D: Structural Biology | Jon Agirre Mihaela Atanasova Haroldas Bagdonas Charles B Ballard Arnaud Baslé | 2023/6/1 |
Engineering a Carboxyl Methyltransferase for the Formation of a Furan‐Based Bioplastic Precursor | ChemSusChem | Lucy C Ward Ellie Goulding Daniel J Rigden Faye E Allan Alessandro Pellis | 2023/8/21 |
DirectRMDB: a database of post-transcriptional RNA modifications unveiled from direct RNA sequencing technology | Nucleic acids research | Yuxin Zhang Jie Jiang Jiongming Ma Zhen Wei Yue Wang | 2023/1/6 |
m6A-TSHub: Unveiling the Context-Specific m6A Methylation and m6A-Affecting Mutations in 23 Human Tissues | Genomics, proteomics & bioinformatics | Bowen Song Daiyun Huang Yuxin Zhang Zhen Wei Jionglong Su | 2023/8 |
Assessment of three‐dimensional RNA structure prediction in CASP15 | Proteins: Structure, Function, and Bioinformatics | Rhiju Das Rachael C Kretsch Adam J Simpkin Thomas Mulvaney Phillip Pham | 2023/12 |
RMDisease V2. 0: an updated database of genetic variants that affect RNA modifications with disease and trait implication | Nucleic Acids Research | Bowen Song Xuan Wang Zhanmin Liang Jiongming Ma Daiyun Huang | 2023/1/6 |
An exonuclease V homologue is expressed predominantly during early megasporogenesis in apomictic Brachiaria brizantha | Planta | Diva MA Dusi Elizângela R Alves Gláucia B Cabral Luciane V Mello Daniel J Rigden | 2023/7 |
Cover Image, Volume 91, Issue 12 | Proteins: Structure, Function, and Bioinformatics | Rhiju Das Rachael C Kretsch Adam J Simpkin Thomas Mulvaney Phillip Pham | 2023/12 |
To split or not to split: CASP15 targets and their processing into tertiary structure evaluation units | Proteins: Structure, Function, and Bioinformatics | Andriy Kryshtafovych Daniel J Rigden | 2023/12 |
Breaking the conformational ensemble barrier: Ensemble structure modeling challenges in CASP15 | Proteins: Structure, Function, and Bioinformatics | Andriy Kryshtafovych Gaetano T Montelione Daniel J Rigden Shahram Mesdaghi Ezgi Karaca | 2023/12 |
Deep Learning-based structural and functional annotation of Pandoravirus hypothetical proteins | bioRxiv | Joseph L Horder Abbie J Connor Amy L Duggan Joshua J Hale Frederick J McDermott | 2023 |
Structural insights into pink-eyed dilution protein (Oca2) | Bioscience reports | Shahram Mesdaghi David L Murphy Adam J Simpkin Daniel J Rigden | 2023/7 |
Predicted models and CCP4 | Acta Crystallographica Section D: Structural Biology | Adam J Simpkin Iracema Caballero Stuart McNicholas Kyle Stevenson Elisabet Jiménez | 2023/9/1 |
CASP15 cryo‐EM protein and RNA targets: Refinement and analysis using experimental maps | Proteins: Structure, Function, and Bioinformatics | Thomas Mulvaney Rachael C Kretsch Luc Elliott Joseph G Beton Andriy Kryshtafovych | 2023/12 |
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