Dan Knights

Dan Knights

University of Minnesota-Twin Cities

H-index: 71

North America-United States

About Dan Knights

Dan Knights, With an exceptional h-index of 71 and a recent h-index of 69 (since 2020), a distinguished researcher at University of Minnesota-Twin Cities, specializes in the field of Computational Biology, Machine Learning, Bioinformatics.

His recent articles reflect a diverse array of research interests and contributions to the field:

Author Correction: Shallow shotgun sequencing reduces technical variation in microbiome analysis

Assembly, stability, and dynamics of the infant gut microbiome are linked to bacterial strains and functions in mother's milk

Microbiome based systems, apparatus and methods for the exploration and production of hydrocarbons

Human Cytomegalovirus in breast milk is associated with milk composition, the infant gut microbiome, and infant growth

Hmong microbiome ANd Gout, Obesity, Vitamin C (HMANGO-C): A phase II clinical study protocol

P07-059-23 Temporal Pattern of P-Cresol Production in Infants Revealed by Fecal Metabolomic Analysis

Human milk variation is shaped by maternal genetics and impacts the infant gut microbiome

OR22-04-23 Immunometabolic Effects of Physicochemically-Distinct Dietary Fibers in Adults With Excess Body Weight: Towards Personalized Dietary Fiber Strategies

Dan Knights Information

University

Position

___

Citations(all)

112480

Citations(since 2020)

73152

Cited By

70193

hIndex(all)

71

hIndex(since 2020)

69

i10Index(all)

134

i10Index(since 2020)

126

Email

University Profile Page

University of Minnesota-Twin Cities

Google Scholar

View Google Scholar Profile

Dan Knights Skills & Research Interests

Computational Biology

Machine Learning

Bioinformatics

Top articles of Dan Knights

Title

Journal

Author(s)

Publication Date

Author Correction: Shallow shotgun sequencing reduces technical variation in microbiome analysis

Scientific reports

Alex J La Reau

Noah B Strom

Ellen Filvaroff

Konstantinos Mavrommatis

Tonya L Ward

...

2024

Assembly, stability, and dynamics of the infant gut microbiome are linked to bacterial strains and functions in mother's milk

bioRxiv

Mattea Allert

Pamela Ferretti

Kelsey Johnson

Timothy Heisel

Sara Gonia

...

2024

Microbiome based systems, apparatus and methods for the exploration and production of hydrocarbons

2023/4/18

Human Cytomegalovirus in breast milk is associated with milk composition, the infant gut microbiome, and infant growth

bioRxiv

Kelsey E Johnson

Timothy Heisel

David A Fields

Elvira Isganaitis

Katherine M Jacobs

...

2023/7/19

Hmong microbiome ANd Gout, Obesity, Vitamin C (HMANGO-C): A phase II clinical study protocol

Plos one

Ya-Feng Wen

Kathleen A Culhane-Pera

Shannon L Pergament

Yeng Moua

Bai Vue

...

2023/2/1

P07-059-23 Temporal Pattern of P-Cresol Production in Infants Revealed by Fecal Metabolomic Analysis

Current Developments in Nutrition

Rui Su

Suzie Hoops

Islam Mabrouk

Dan Knights

Jeffrey Gerber

...

2023/7/1

Human milk variation is shaped by maternal genetics and impacts the infant gut microbiome

BioRxiv

Kelsey E Johnson

Timothy Heisel

Mattea Allert

Annalee Fürst

Nikhila Yerabandi

...

2023/1/25

OR22-04-23 Immunometabolic Effects of Physicochemically-Distinct Dietary Fibers in Adults With Excess Body Weight: Towards Personalized Dietary Fiber Strategies

Current Developments in Nutrition

Anissa Armet

Fuyong Li

Edward Deehan

Daria Nikolaeva

Katri Korpela

...

2023/7/1

Industrialized human gut microbiota increases CD8+ T cells and mucus thickness in humanized mouse gut

Gut microbes

Pajau Vangay

Tonya Ward

Sarah Lucas

Lalit K Beura

Dominique Sabas

...

2023/12/18

Successful weight regain attenuation by autologous fecal microbiota transplantation is associated with non-core gut microbiota changes during weight loss; randomized controlled …

Gut microbes

Omer Kamer

Ehud Rinott

Gal Tsaban

Alon Kaplan

Anat Yaskolka Meir

...

2023/12/18

49-LB: A Low Biologically Available Glucose Diet Reduces Hemoglobin A1c in Type 2 Diabetes Mellitus—A Randomized Controlled Trial

Diabetes

JULIE D ANDERSON

MICHELLE A HANSON

LESIA F LYSNE

LYNN E EBERLY

ELIZABETH R SEAQUIST

...

2023/6/20

Shallow shotgun sequencing reduces technical variation in microbiome analysis

Scientific reports

Alex J La Reau

Noah B Strom

Ellen Filvaroff

Konstantinos Mavrommatis

Tonya L Ward

...

2023/5/11

LMdist: Local Manifold distance accurately measures beta diversity in ecological gradients

Bioinformatics

Susan L Hoops

Dan Knights

2023/12/1

The effects of the Green-Mediterranean diet on cardiometabolic health are linked to gut microbiome modifications: A randomized controlled trial

Genome medicine

Ehud Rinott

Anat Yaskolka Meir

Gal Tsaban

Hila Zelicha

Alon Kaplan

...

2022/3/10

Host species and captivity distinguish the microbiome compositions of a diverse zoo-resident non-human primate population

Diversity

Maya O Wills

Robin R Shields-Cutler

Emily Brunmeier

Madison Weissenborn

Tami Murphy

...

2022/8/29

Weight Loss Associated With Time Restricted Eating Is Not Reflected in Changes in the Human Gut Microbiome

Current Developments in Nutrition

Anne Bantle

Alison Alvear

Dan Knights

Lisa Chow

Abigail Johnson

2022/6/1

Identification of shared and disease-specific host gene–microbiome associations across human diseases using multi-omic integration

Nature microbiology

Sambhawa Priya

Michael B Burns

Tonya Ward

Ruben AT Mars

Beth Adamowicz

...

2022/6

Elucidating the role of the gut microbiota in the physiological effects of dietary fiber

Microbiome

Edward C Deehan

Zhengxiao Zhang

Alessandra Riva

Anissa M Armet

Maria Elisa Perez-Muñoz

...

2022/12

Bacterial communities associated with wood rot fungi that use distinct decomposition mechanisms

ISME communications

Irshad Ul Haq

Benjamin Hillmann

Molly Moran

Samuel Willard

Dan Knights

...

2022/12

Supplementation with a probiotic mixture accelerates gut microbiome maturation and reduces intestinal inflammation in extremely preterm infants

Cell Host & Microbe

Jumana Samara

Shirin Moossavi

Belal Alshaikh

Van A Ortega

Veronika Kuchařová Pettersen

...

2022/5/11

See List of Professors in Dan Knights University(University of Minnesota-Twin Cities)

Co-Authors

H-index: 234
Rob Knight

Rob Knight

University of California, San Diego

H-index: 128
Curtis Huttenhower

Curtis Huttenhower

Harvard University

H-index: 77
J Gregory Caporaso

J Gregory Caporaso

Northern Arizona University

H-index: 70
Catherine Lozupone

Catherine Lozupone

University of Colorado Denver

H-index: 66
Antonio González

Antonio González

University of California, San Diego

H-index: 63
Jose C. Clemente

Jose C. Clemente

Icahn School of Medicine at Mount Sinai

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