Brian Munsky

Brian Munsky

Colorado State University

H-index: 25

North America-United States

About Brian Munsky

Brian Munsky, With an exceptional h-index of 25 and a recent h-index of 18 (since 2020), a distinguished researcher at Colorado State University, specializes in the field of Quantitative Biology, Computational Systems Biology.

His recent articles reflect a diverse array of research interests and contributions to the field:

Integrating single-cell experiments and stochastic models to understand and predict glucocorticoid receptor transport and DUSP1 mRNA expression dynamics

Experimental methods and mathematical modeling quantify and predict DUSP1 RNA expression dynamics in response to dexamethasone

Using Finite State Projection and Fisher Information to Improve Single-Cell Experiment Design to Gain Better Understanding of DUSP1 Transcription Dynamics

Exploiting Noise, Non-Linearity, and Feedback to Differentially Control Multiple Different Cells Using a Single Optogenetic Input

Ten simple rules for managing laboratory information

Using mechanistic models and machine learning to design single-color multiplexed nascent chain tracking experiments

Analysis and design of single-cell experiments to harvest fluctuation information while rejecting measurement noise

Non-equilibrium structural dynamics of supercoiled DNA plasmids exhibits asymmetrical relaxation

Brian Munsky Information

University

Position

___

Citations(all)

4479

Citations(since 2020)

1929

Cited By

3377

hIndex(all)

25

hIndex(since 2020)

18

i10Index(all)

43

i10Index(since 2020)

29

Email

University Profile Page

Colorado State University

Google Scholar

View Google Scholar Profile

Brian Munsky Skills & Research Interests

Quantitative Biology

Computational Systems Biology

Top articles of Brian Munsky

Title

Journal

Author(s)

Publication Date

Integrating single-cell experiments and stochastic models to understand and predict glucocorticoid receptor transport and DUSP1 mRNA expression dynamics

Biophysical Journal

Eric M Ron

Luis U Aguilera

Linda S Forero Quintero

Joshua Cook

Brian Munsky

2024/2/8

Experimental methods and mathematical modeling quantify and predict DUSP1 RNA expression dynamics in response to dexamethasone

Biophysical Journal

Eric M Ron

Linda S Forero Quintero

Luis U Aguilera

Joshua Cook

Brian Munsky

2023/2/10

Using Finite State Projection and Fisher Information to Improve Single-Cell Experiment Design to Gain Better Understanding of DUSP1 Transcription Dynamics

Joshua A Cook

2023

Exploiting Noise, Non-Linearity, and Feedback to Differentially Control Multiple Different Cells Using a Single Optogenetic Input

Michael P May

2023

Ten simple rules for managing laboratory information

PLoS computational biology

Casey-Tyler Berezin

Luis U Aguilera

Sonja Billerbeck

Philip E Bourne

Douglas Densmore

...

2023/12/7

Using mechanistic models and machine learning to design single-color multiplexed nascent chain tracking experiments

Frontiers in Cell and Developmental Biology

William S Raymond

Sadaf Ghaffari

Luis U Aguilera

Eric Ron

Tatsuya Morisaki

...

2023/5/30

Analysis and design of single-cell experiments to harvest fluctuation information while rejecting measurement noise

Frontiers in Cell and Developmental Biology

Huy D Vo

Linda S Forero-Quintero

Luis U Aguilera

Brian Munsky

2023/5/26

Non-equilibrium structural dynamics of supercoiled DNA plasmids exhibits asymmetrical relaxation

Nucleic Acids Research

Cynthia Shaheen

Cameron Hastie

Kimberly Metera

Shane Scott

Zhi Zhang

...

2022/3/21

Microbial communities influence soil dissolved organic carbon concentration by altering metabolite composition

Frontiers in Microbiology

Tayte P Campbell

Danielle EM Ulrich

Jason Toyoda

Jaron Thompson

Brian Munsky

...

2022/1/20

Visualization, Quantification, and Modeling of Endogenous RNA Polymerase II Phosphorylation at a Single-copy Gene in Living Cells

Bio-protocol

Linda S Forero-Quintero

William Raymond

Brian Munsky

Timothy J Stasevich

2022/8/5

Biochemical noise enables a single optogenetic input to control identical cells to track asymmetric and asynchronous reference signals

bioRxiv

Michael P May

Brian Munsky

2022/7/5

Optogenetic Maxwell Demon to Exploit Intrinsic Noise and Control Cell Differentiation Despite Time Delays and Extrinsic Variability

bioRxiv

Michael P May

Brian Munsky

2022/7/5

Visualization and modeling of inhibition of IL-1β and TNF-α mRNA transcription at the single-cell level

Scientific Reports

Daniel Kalb

Huy D Vo

Samantha Adikari

Elizabeth Hong-Geller

Brian Munsky

...

2021/7/1

Live-cell imaging reveals the spatiotemporal organization of endogenous RNA polymerase II phosphorylation at a single gene

Nature Communications

Linda S Forero-Quintero

William Raymond

Tetsuya Handa

Matthew N Saxton

Tatsuya Morisaki

...

2021/5/26

Exploiting noise, non-linearity, and feedback for differential control of multiple synthetic cells with a single optogenetic input

ACS synthetic biology

Michael P May

Brian Munsky

2021/11/18

Microbial community composition controls carbon flux across litter types in early phase of litter decomposition

Environmental Microbiology

Marie E Kroeger

M Rae DeVan

Jaron Thompson

Renee Johansen

La Verne Gallegos‐Graves

...

2021/11

Building predictive signaling models by perturbing yeast cells with time-varying stimulations resulting in distinct signaling responses

Star Protocols

Hossein Jashnsaz

Zachary R Fox

Brian Munsky

Gregor Neuert

2021/9/17

Probabilistic Ranking Of Microbiomes Plus Taxa Selection to discover and validate microbiome function models for multiple litter decomposition studies

bioRxiv

Jaron Thompson

Nicholas Lubbers

Marie E Kroeger

Rae DeVan

Renee Johansen

...

2020/7/17

Machine Learning Methods to Discover Patterns in Microbially Driven Soil Carbon Sequestration

Jaron Thompson

2020

A parallel implementation of the finite state projection algorithm for the solution of the chemical master equation

bioRxiv

Huy Vo

Brian Munsky

2020/7/1

See List of Professors in Brian Munsky University(Colorado State University)

Co-Authors

H-index: 74
Christopher Voigt

Christopher Voigt

Massachusetts Institute of Technology

H-index: 36
Ilya Nemenman

Ilya Nemenman

Emory University

H-index: 35
Farhan Gandhi

Farhan Gandhi

Rensselaer Polytechnic Institute

H-index: 30
Timothy J. Stasevich

Timothy J. Stasevich

Colorado State University

H-index: 19
Tatsuya Morisaki

Tatsuya Morisaki

Colorado State University

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