Bin Chen

Bin Chen

Michigan State University

H-index: 32

North America-United States

About Bin Chen

Bin Chen, With an exceptional h-index of 32 and a recent h-index of 28 (since 2020), a distinguished researcher at Michigan State University, specializes in the field of Translational Bioinformatics, Cheminformatics, Drug Repositioning, Drug Discovery.

His recent articles reflect a diverse array of research interests and contributions to the field:

Comparison of Prompt Engineering and Fine-Tuning Strategies in Large Language Models in the Classification of Clinical Notes

Contributions of ATP12A, a non-gastric proton pump alpha subunit, to the pathogenesis of idiopathic pulmonary fibrosis

Computational discovery of co-expressed antigens as dual targeting candidates for cancer therapy through bulk, single-cell, and spatial transcriptomics

Detection of viral infection in cell lines using ViralCellDetector

Bulk RNA-Sequencing of small airway cell cultures from IPF and post-COVID lung fibrosis patients illustrates disease signatures and differential responses to TGF-β1 treatment

Abstract B037: Elevated mitochondrial activity is a targetable signature of prostate cancer bone metastases

scRNA-Seq and imaging mass cytometry analyses unveil iNKT cells-mediated anti-tumor immunity in pancreatic cancer liver metastasis

TransCell: In silico Characterization of Genomic Landscape and Cellular Responses by Deep Transfer Learning

Bin Chen Information

University

Position

___

Citations(all)

3943

Citations(since 2020)

2549

Cited By

2370

hIndex(all)

32

hIndex(since 2020)

28

i10Index(all)

51

i10Index(since 2020)

43

Email

University Profile Page

Michigan State University

Google Scholar

View Google Scholar Profile

Bin Chen Skills & Research Interests

Translational Bioinformatics

Cheminformatics

Drug Repositioning

Drug Discovery

Top articles of Bin Chen

Title

Journal

Author(s)

Publication Date

Comparison of Prompt Engineering and Fine-Tuning Strategies in Large Language Models in the Classification of Clinical Notes

medRxiv

Xiaodan Zhang

Nabasmita Talukdar

Sandeep Vemulapalli

Sumyeong Ahn

Jiankun Wang

...

2024

Contributions of ATP12A, a non-gastric proton pump alpha subunit, to the pathogenesis of idiopathic pulmonary fibrosis

Xiaopeng Li

Mohamed Abdelgied

Katie Uhl

Oliver Chen

Chad Schultz

...

2023/5/23

Computational discovery of co-expressed antigens as dual targeting candidates for cancer therapy through bulk, single-cell, and spatial transcriptomics

bioRxiv

Evgenii Chekalin

Shreya Paithankar

Rama Shankar

Jing Xing

Wenfeng Xu

...

2023

Detection of viral infection in cell lines using ViralCellDetector

bioRxiv

Rama Shankar

Shreya Paithankar

Suchir Gupta

Bin Chen

2023/7/25

Bulk RNA-Sequencing of small airway cell cultures from IPF and post-COVID lung fibrosis patients illustrates disease signatures and differential responses to TGF-β1 treatment

bioRxiv

Katie Uhl

Shreya Paithankar

Dmitry Leshchiner

Tara E Jager

Mohamed Abdelgied

...

2023/3/1

Abstract B037: Elevated mitochondrial activity is a targetable signature of prostate cancer bone metastases

Cancer Research

Shang Su

Ke Liu

Jing Xing

Yawei Zhao

Ruihua Liu

...

2023/6/2

scRNA-Seq and imaging mass cytometry analyses unveil iNKT cells-mediated anti-tumor immunity in pancreatic cancer liver metastasis

Cancer letters

Qijun Yi

Jie Wang

Tingting Liu

Yi Yao

Ian Loveless

...

2023/5/1

TransCell: In silico Characterization of Genomic Landscape and Cellular Responses by Deep Transfer Learning

bioRxiv

Shan-Ju Yeh

Shreya Paithankar

Ruoqiao Chen

Jing Xing

Mengying Sun

...

2022/5/20

Comparison of Machine Learning Methods in Mild Cognitive Impairment Prediction for Cancer Patients Using EHR Data

medRxiv

Xiaodan Zhang

Martin Witteveen-Lane

Yanzeng Li

Omkar Kulkarni

Dave Chesla

...

2023

Dihydroxy-Metabolites of Dihomo-γ-linolenic Acid Drive Ferroptosis-Mediated Neurodegeneration

ACS Central Science

Morteza Sarparast

Elham Pourmand

Jennifer Hinman

Derek Vonarx

Tommy Reason

...

2023/3/16

Abstract B038: Prostate cancer (PCa) cell dormancy in bone depends on physical contacts between PCa cells and osteoblasts and can be induced via FAK inhibition

Cancer Research

Ruihua Liu

Shang Su

Ke Liu

Jing Xing

Mary Stangis

...

2023/6/2

Large Language Models in Medical Term Classification and Unexpected Misalignment Between Response and Reasoning

arXiv preprint arXiv:2312.14184

Xiaodan Zhang

Sandeep Vemulapalli

Nabasmita Talukdar

Sumyeong Ahn

Jiankun Wang

...

2023/12/19

DIPG-18. AI HUNTING FOR NEW DRUGS IN PEDIATRIC GLIOMA

Neuro-Oncology

Rintaro Hashizume

Patrick Newbury

Yukitomo Ishi

Guisheng Zao

Benjamin Glicksberg

...

2023/6

Placental circadian lincRNAs and spontaneous preterm birth

Frontiers in Genetics

Guoli Zhou

Raina N Fichorova

Claudia Holzman

Bin Chen

Chi Chang

...

2023/1/11

Differential Transcriptomic Signatures of Small Airway Cell Cultures Derived from IPF and COVID-19-Induced Exacerbation of Interstitial Lung Disease

Cells

Katie Uhl

Shreya Paithankar

Dmitry Leshchiner

Tara E. Jager

Mohamed Abdelgied

...

2023/10

Targeting ATP12A, a Nongastric Proton Pump α Subunit, for Idiopathic Pulmonary Fibrosis Treatment

American Journal of Respiratory Cell and Molecular Biology

Mohamed Abdelgied

Katie Uhl

Oliver G Chen

Chad Schultz

Kaylie Tripp

...

2023/6

Tumor removal limits prostate cancer cell dissemination in bone and osteoblasts induce cancer cell dormancy through focal adhesion kinase

Journal of Experimental & Clinical Cancer Research

Ruihua Liu

Shang Su

Jing Xing

Ke Liu

Yawei Zhao

...

2023/10/11

Large-Scale Information Retrieval and Correction of Noisy Pharmacogenomic Datasets through Residual Thresholded Deep Matrix Factorization

bioRxiv

Zhiyue Tom Hu

Yaodong Yu

Ruoqiao Chen

Shan-Ju Yeh

Bin Chen

...

2023

COVID-19 portal: Profiling researchers, bio-entities, and institutions

iConference, Feb 28-March 4, 2022

Aoshen Wan

2022/1

Deciphering COVID-19 host transcriptomic complexity and variations for therapeutic discovery against new variants

Iscience

Jing Xing

Rama Shankar

Meehyun Ko

Keke Zhang

Sulin Zhang

...

2022/10/21

See List of Professors in Bin Chen University(Michigan State University)

Co-Authors

H-index: 107
Atul J. Butte

Atul J. Butte

University of California, San Francisco

H-index: 27
David J. Wild

David J. Wild

Indiana University Bloomington

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