Bence Szalai

Bence Szalai

Semmelweis Egyetem

H-index: 15

Europe-Hungary

About Bence Szalai

Bence Szalai, With an exceptional h-index of 15 and a recent h-index of 14 (since 2020), a distinguished researcher at Semmelweis Egyetem, specializes in the field of computational biology, bioinformatics, systems pharmacology, cancer research, functional genomics.

His recent articles reflect a diverse array of research interests and contributions to the field:

An unexpected enzyme in vascular smooth muscle cells: angiotensin II upregulates cholesterol-25-hydroxylase gene expression

Application of perturbation gene expression profiles in drug discovery—From mechanism of action to quantitative modelling

The EFFECT benchmark suite: measuring cancer sensitivity prediction performance-without the bias

Cannabinoid receptor type 1 (CB1R) inhibits hypothalamic leptin signaling via β-arrestin1 in complex with TC-PTP and STAT3

Receptor endocytosis orchestrates the spatiotemporal bias of β-arrestin signaling

Patient-specific Boolean models of signalling networks guide personalised treatments

A community challenge for a pancancer drug mechanism of action inference from perturbational profile data

Combi-seq for multiplexed transcriptome-based profiling of drug combinations using deterministic barcoding in single-cell droplets

Bence Szalai Information

University

Position

___

Citations(all)

1435

Citations(since 2020)

1278

Cited By

469

hIndex(all)

15

hIndex(since 2020)

14

i10Index(all)

15

i10Index(since 2020)

15

Email

University Profile Page

Semmelweis Egyetem

Google Scholar

View Google Scholar Profile

Bence Szalai Skills & Research Interests

computational biology

bioinformatics

systems pharmacology

cancer research

functional genomics

Top articles of Bence Szalai

Title

Journal

Author(s)

Publication Date

An unexpected enzyme in vascular smooth muscle cells: angiotensin II upregulates cholesterol-25-hydroxylase gene expression

International Journal of Molecular Sciences

Kinga Bernadett Kovács

Laura Szalai

Pál Szabó

Janka Borbála Gém

Szilvia Barsi

...

2023/2/16

Application of perturbation gene expression profiles in drug discovery—From mechanism of action to quantitative modelling

Bence Szalai

Dániel V Veres

2023/2/9

The EFFECT benchmark suite: measuring cancer sensitivity prediction performance-without the bias

bioRxiv

Bence Szalai

Imre Gáspár

Valér Kaszás

László Mérő

Milán Sztilkovics

...

2023/10/3

Cannabinoid receptor type 1 (CB1R) inhibits hypothalamic leptin signaling via β-arrestin1 in complex with TC-PTP and STAT3

Iscience

Gergő Szanda

Tony Jourdan

Éva Wisniewski

Resat Cinar

Grzegorz Godlewski

...

2023/7/21

Receptor endocytosis orchestrates the spatiotemporal bias of β-arrestin signaling

bioRxiv

Andras David Toth

Bence Szalai

Orsolya Tunde Kovacs

Daniel Garger

Susanne Prokop

...

2023

Patient-specific Boolean models of signalling networks guide personalised treatments

Elife

Arnau Montagud

Jonas Béal

Luis Tobalina

Pauline Traynard

Vigneshwari Subramanian

...

2022/2/15

A community challenge for a pancancer drug mechanism of action inference from perturbational profile data

Cell Reports Medicine

Eugene F Douglass

Robert J Allaway

Bence Szalai

Wenyu Wang

Tingzhong Tian

...

2022/1/18

Combi-seq for multiplexed transcriptome-based profiling of drug combinations using deterministic barcoding in single-cell droplets

Nature communications

Lukas Mathur

B Szalai

NH Du

R Utharala

M Ballinger

...

2022/8/1

Comparison of methods and resources for cell-cell communication inference from single-cell RNA-Seq data

Nature communications

Daniel Dimitrov

Dénes Türei

Martin Garrido-Rodriguez

Paul L Burmedi

James S Nagai

...

2022/6/9

Computational drug repurposing against SARS-CoV-2 reveals plasma membrane cholesterol depletion as key factor of antiviral drug activity

PLoS computational biology

Szilvia Barsi

Henrietta Papp

Alberto Valdeolivas

Dániel J Tóth

Anett Kuczmog

...

2022/4/11

Characterization of type 1 angiotensin II receptor activation induced dual-specificity MAPK phosphatase gene expression changes in rat vascular smooth muscle cells

Cells

Janka Borbála Gém

Kinga Bernadett Kovács

Laura Szalai

Gyöngyi Szakadáti

Edit Porkoláb

...

2021/12

Modeling in systems biology: Causal understanding before prediction?

Patterns

Szilvia Barsi

Bence Szalai

2021/6/11

Crowdsourced mapping of unexplored target space of kinase inhibitors

Nature communications

Anna Cichońska

Balaguru Ravikumar

Robert J Allaway

Fangping Wan

Sungjoon Park

...

2021/6/3

Robustness and applicability of transcription factor and pathway analysis tools on single-cell RNA-seq data

Genome biology

Christian H Holland

Jovan Tanevski

Javier Perales-Patón

Jan Gleixner

Manu P Kumar

...

2020/12

Inferring clonal composition from multiple tumor biopsies

NPJ systems biology and applications

Matteo Manica

Hyunjae Ryan Kim

Roland Mathis

Philippe Chouvarine

Dorothea Rutishauser

...

2020/8/25

Transfer of regulatory knowledge from human to mouse for functional genomics analysis

Biochimica et Biophysica Acta (BBA)-Gene Regulatory Mechanisms

Christian H Holland

Bence Szalai

Julio Saez-Rodriguez

2020/6/1

Why do pathway methods work better than they should?

FEBS letters

Bence Szalai

Julio Saez‐Rodriguez

2020/12

See List of Professors in Bence Szalai University(Semmelweis Egyetem)

Co-Authors

H-index: 84
Julio Saez Rodriguez

Julio Saez Rodriguez

Ruprecht-Karls-Universität Heidelberg

H-index: 27
Richard C Gerkin

Richard C Gerkin

Arizona State University

H-index: 12
Christian Holland

Christian Holland

Ruprecht-Karls-Universität Heidelberg

H-index: 12
Javier Perales-Patón

Javier Perales-Patón

Ruprecht-Karls-Universität Heidelberg

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