Avi Ma'ayan

Avi Ma'ayan

Icahn School of Medicine at Mount Sinai

H-index: 77

North America-United States

About Avi Ma'ayan

Avi Ma'ayan, With an exceptional h-index of 77 and a recent h-index of 61 (since 2020), a distinguished researcher at Icahn School of Medicine at Mount Sinai, specializes in the field of Computational Biology, Systems Biology, Bioinformatics, Systems Pharmacology.

His recent articles reflect a diverse array of research interests and contributions to the field:

A proteogenomic study of high-grade glioma among adolescents and young adults

Programming a Ferroptosis‐to‐Apoptosis Transition Landscape Revealed Ferroptosis Biomarkers and Repressors for Cancer Therapy

Pan-cancer proteogenomics characterization of tumor immunity

Rummagene: massive mining of gene sets from supporting materials of biomedical research publications

RummaGEO: Automatic Mining of Human and Mouse Gene Sets from GEO

Personalized cell surface target identification from pan-cancer RNA-seq and proteomics profiling of tumors

Optimizing pan-cancer driver pathway analysis from patient transcriptomics and phosphoproteomics

PrismExp: gene annotation prediction from stratified gene-gene co-expression matrices

Avi Ma'ayan Information

University

Position

Professor New York NY

Citations(all)

45933

Citations(since 2020)

29934

Cited By

27076

hIndex(all)

77

hIndex(since 2020)

61

i10Index(all)

175

i10Index(since 2020)

143

Email

University Profile Page

Icahn School of Medicine at Mount Sinai

Google Scholar

View Google Scholar Profile

Avi Ma'ayan Skills & Research Interests

Computational Biology

Systems Biology

Bioinformatics

Systems Pharmacology

Top articles of Avi Ma'ayan

Title

Journal

Author(s)

Publication Date

A proteogenomic study of high-grade glioma among adolescents and young adults

Cancer Research

Nicole Tignor

Mateusz P Koptyra

Shrabanti Chowdhury

Weiping Ma

Jo Lynne Rokita

...

2024/3/22

Programming a Ferroptosis‐to‐Apoptosis Transition Landscape Revealed Ferroptosis Biomarkers and Repressors for Cancer Therapy

Advanced Science

Yaron Vinik

Avi Maimon

Vinay Dubey

Harsha Raj

Ifat Abramovitch

...

2024/3/5

Pan-cancer proteogenomics characterization of tumor immunity

Cell

Francesca Petralia

Weiping Ma

Tomer M Yaron

Francesca Pia Caruso

Nicole Tignor

...

2024/2/12

Rummagene: massive mining of gene sets from supporting materials of biomedical research publications

Communications Biology

Daniel JB Clarke

Giacomo B Marino

Eden Z Deng

Zhuorui Xie

John Erol Evangelista

...

2024/4/20

RummaGEO: Automatic Mining of Human and Mouse Gene Sets from GEO

bioRxiv

Giacomo B Marino

Daniel JB Clarke

Eden Z Deng

Avi Ma'ayan

2024

Personalized cell surface target identification from pan-cancer RNA-seq and proteomics profiling of tumors

Cancer Research

Giacomo B Marino

Eden Z Deng

Daniel JB Clarke

Weiping Ma

Pei Wang

...

2024/3/22

Optimizing pan-cancer driver pathway analysis from patient transcriptomics and phosphoproteomics

Cancer Research

Eden Z Deng

Giacomo B Marino

Daniel J Clarke

Weiping Ma

Pei Wang

...

2024/3/22

PrismExp: gene annotation prediction from stratified gene-gene co-expression matrices

PeerJ

Alexander Lachmann

Kaeli A Rizzo

Alon Bartal

Minji Jeon

Daniel JB Clarke

...

2023/2/27

Toxicology knowledge graph for structural birth defects

Communications Medicine

John Erol Evangelista

Daniel JB Clarke

Zhuorui Xie

Giacomo B Marino

Vivian Utti

...

2023/7/17

D2H2: diabetes data and hypothesis hub

Bioinformatics Advances

Giacomo B Marino

Nasheath Ahmed

Zhuorui Xie

Kathleen M Jagodnik

Jason Han

...

2023/1/1

Enrichr-KG: bridging enrichment analysis across multiple libraries

Nucleic acids research

John Erol Evangelista

Zhuorui Xie

Giacomo B Marino

Nhi Nguyen

Daniel JB Clarke

...

2023/7/5

GeneRanger and TargetRanger: processed gene and protein expression levels across cells and tissues for target discovery

Nucleic Acids Research

Giacomo B Marino

Michael Ngai

Daniel JB Clarke

Reid H Fleishman

Eden Z Deng

...

2023/7/5

Dex-Benchmark: datasets and code to evaluate algorithms for transcriptomics data analysis

PeerJ

Zhuorui Xie

Clara Chen

Avi Ma’ayan

2023

Systems immunology-based drug repurposing framework to target inflammation in atherosclerosis

Nature cardiovascular research

Letizia Amadori

Claudia Calcagno

Dawn M Fernandez

Simon Koplev

Nicolas Fernandez

...

2023/6

Proteogenomic insights suggest druggable pathways in endometrial carcinoma

Cancer cell

Yongchao Dou

Lizabeth Katsnelson

Marina A Gritsenko

Yingwei Hu

Boris Reva

...

2023/9/11

Rummagene: Mining Gene Sets from Supporting Materials of PMC Publications

bioRxiv

Daniel JB Clarke

Giacomo B Marino

Eden Z Deng

Zhuorui Xie

John Erol Evangelista

...

2023

Computational screen to identify potential targets for immunotherapeutic identification and removal of senescence cells

Aging Cell

Eden Z Deng

Reid H Fleishman

Zhuorui Xie

Giacomo B Marino

Daniel JB Clarke

...

2023/6

lncHUB2: aggregated and inferred knowledge about human and mouse lncRNAs

Database

Giacomo B Marino

Megan L Wojciechowicz

Daniel JB Clarke

Maxim V Kuleshov

Zhuorui Xie

...

2023/1/1

Publisher Correction: Systems immunology-based drug repurposing framework to target inflammation in atherosclerosis

Nature Cardiovascular Research

Letizia Amadori

Claudia Calcagno

Dawn M Fernandez

Simon Koplev

Nicolas Fernandez

...

2023/8

Transcriptomic profiling of recessive dystrophic epidermolysis bullosa wounded skin highlights drug repurposing opportunities to improve wound healing

Experimental Dermatology

Alexandros Onoufriadis

Laura E Proudfoot

Chrysanthi Ainali

Denis Torre

Maria Papanikolaou

...

2022/3

See List of Professors in Avi Ma'ayan University(Icahn School of Medicine at Mount Sinai)

Co-Authors

H-index: 125
Miriam Merad

Miriam Merad

Icahn School of Medicine at Mount Sinai

H-index: 113
Peter K. Sorger

Peter K. Sorger

Harvard University

H-index: 38
Michael Rendl

Michael Rendl

Icahn School of Medicine at Mount Sinai

H-index: 33
Dmitri Papatsenko

Dmitri Papatsenko

Icahn School of Medicine at Mount Sinai

H-index: 30
Alexander Lachmann

Alexander Lachmann

Icahn School of Medicine at Mount Sinai

H-index: 30
Sandeep K. Mallipattu

Sandeep K. Mallipattu

Stony Brook University

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