Anna Ritz

Anna Ritz

Reed College

H-index: 20

North America-United States

About Anna Ritz

Anna Ritz, With an exceptional h-index of 20 and a recent h-index of 14 (since 2020), a distinguished researcher at Reed College, specializes in the field of Algorithms, Computational Biology, Structural Variant Detection, Biological Network Analysis, Signaling Pathway Analysis.

His recent articles reflect a diverse array of research interests and contributions to the field:

Simplifying Signaling Pathway Reconstruction with Containerized Random Walk Algorithms

Current and future directions in network biology

Special Issue Computational Network Biology: Modeling, Analysis, and Control (CNB-MAC) Workshop (2022)

Growing Directed Acyclic Graphs: Optimization Functions for Pathway Reconstruction Algorithms

Identification of disease modules using higher-order network structure

Identifying network communities using higher-order structures

From network analysis to experimental validation: identification of regulators of non-muscle myosin II contractility using the folded-gastrulation signaling pathway

Transformer neural networks for protein family and interaction prediction tasks

Anna Ritz Information

University

Position

Associate Professor

Citations(all)

1187

Citations(since 2020)

646

Cited By

785

hIndex(all)

20

hIndex(since 2020)

14

i10Index(all)

24

i10Index(since 2020)

17

Email

University Profile Page

Reed College

Google Scholar

View Google Scholar Profile

Anna Ritz Skills & Research Interests

Algorithms

Computational Biology

Structural Variant Detection

Biological Network Analysis

Signaling Pathway Analysis

Top articles of Anna Ritz

Title

Journal

Author(s)

Publication Date

Simplifying Signaling Pathway Reconstruction with Containerized Random Walk Algorithms

Yancheng Liu

Anna Ritz

2024/3/14

Current and future directions in network biology

arXiv preprint arXiv:2309.08478

Marinka Zitnik

Michelle M Li

Aydin Wells

Kimberly Glass

Deisy Morselli Gysi

...

2023/9/15

Special Issue Computational Network Biology: Modeling, Analysis, and Control (CNB-MAC) Workshop (2022)

Journal of computational biology: a journal of computational molecular cell biology

Hyundoo Jeong

José Lugo-Martinez

Anna Ritz

Yijie Wang

Chi Zhang

2023/7

Growing Directed Acyclic Graphs: Optimization Functions for Pathway Reconstruction Algorithms

Journal of Computational Biology

Tunç Başar Köse

Jiarong Li

Anna Ritz

2023/7/1

Identification of disease modules using higher-order network structure

Bioinformatics Advances

Pramesh Singh

Hannah Kuder

Anna Ritz

2023/1/1

Identifying network communities using higher-order structures

APS March Meeting Abstracts

Pramesh Singh

Hannah Kuder

Anna Ritz

2023

From network analysis to experimental validation: identification of regulators of non-muscle myosin II contractility using the folded-gastrulation signaling pathway

BMC Molecular and Cell Biology

Andy Zhao

Sophia Varady

Madelyn O’Kelley-Bangsberg

Vicki Deng

Amy Platenkamp

...

2023/10/11

Transformer neural networks for protein family and interaction prediction tasks

Journal of Computational Biology

Ananthan Nambiar

Simon Liu

Maeve Heflin

John Malcolm Forsyth

Sergei Maslov

...

2023/1/1

Temperature‐mediated transgenerational plasticity influences movement behaviour in the green algae Chlamydomonas reinhardtii

Functional Ecology

Hannah S Meier

Isaac J Schuman

Tamara J Layden

Anna Ritz

Colin T Kremer

...

2022/12

FiT: fiber-based tensor completion for drug repurposing

Aysegul Bumin

Anna Ritz

Donna Slonim

Tamer Kahveci

Kejun Huang

2022/8/7

Growing DAGs: Optimization Functions for Pathway Reconstruction Algorithms

bioRxiv

Tunç Başar Köse

Jiarong Li

Anna Ritz

2022/7/29

Graphery: interactive tutorials for biological network algorithms

Nucleic Acids Research

Heyuan Zeng

Jinbiao Zhang

Gabriel A Preising

Tobias Rubel

Pramesh Singh

...

2021/7/2

Cabozantinib and dasatinib synergize to induce tumor regression in non-clear cell renal cell carcinoma

Cell Reports Medicine

Hui-wen Lue

Daniel S Derrick

Soumya Rao

Ahna Van Gaest

Larry Cheng

...

2021/5/18

Reconciling signaling pathway databases with network topologies

Tobias Rubel

Pramesh Singh

Anna Ritz

2021

Stop Bickering! Reconciling Signaling Pathway Databases with Network Topologies

bioRxiv

Tobias Rubel

Pramesh Singh

Anna Ritz

2021/8/4

Ten simple rules for attending your first conference

PLOS Computational Biology

Elizabeth Leininger

Kelly Shaw

Niema Moshiri

Kelly Neiles

Getiria Onsongo

...

2021/7/15

An Ensemble Learning Approach for Cancer Drug Prediction

bioRxiv

Darsh Mandera

Anna Ritz

2020/8/11

Graphery: a Biological Network Algorithm Tutorial Webservice

Heyuan Zeng

Anna Ritz

2020/9/21

Identification of clinical combination therapies to induce durable responses in kidney cancers

bioRxiv

Hui-wen Lue

Daniel S Derrick

Soumya Rao

Anna Van Gaest

Larry Cheng

...

2020/7/26

Prefix/Suffix Variation in Retinoic Acid Response Elements

Yuan Zhuang

Kara L Cerveny

Anna Ritz

2020/9/21

See List of Professors in Anna Ritz University(Reed College)

Co-Authors

H-index: 68
Ben Raphael

Ben Raphael

Princeton University

H-index: 62
David H. Laidlaw

David H. Laidlaw

Brown University

H-index: 44
Greg Shakhnarovich

Greg Shakhnarovich

Toyota Technological Institute

H-index: 32
T. M. Murali

T. M. Murali

Virginia Polytechnic Institute and State University

H-index: 27
Deborah S. Gross

Deborah S. Gross

Carleton College

H-index: 26
Alexander S. Brodsky

Alexander S. Brodsky

Brown University

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