Andrew Stubbs

Andrew Stubbs

Erasmus Universiteit Rotterdam

H-index: 35

Europe-Netherlands

About Andrew Stubbs

Andrew Stubbs, With an exceptional h-index of 35 and a recent h-index of 28 (since 2020), a distinguished researcher at Erasmus Universiteit Rotterdam, specializes in the field of bioinoformatics, ngs, tumor biology, statisical pathways, genetics.

His recent articles reflect a diverse array of research interests and contributions to the field:

Reproducible Exploration of Disease Maps with Galaxy Workflows and the MINERVA Platform

FAIR data retrieval for sensitive clinical research data in Galaxy

The heterogeneous sensitivity of pediatric brain tumors to different oncolytic viruses is predicted by unique gene expression profiles

Multiomic profiling of transplant glomerulopathy reveals a novel T-cell dominant subclass

Training infrastructure as a service

Artificial Intelligence in Digital Pathology for Bladder Cancer: Hype or Hope? A Systematic Review

P10. 23. AA PATIENT-DERIVED FUNCTIONAL GBM DRUG SCREEN OFFERS A TOOL TO PREDICT TMZ RESPONSE AND ASSESS SENSITIVITY TO CANDIDATE TREATMENTS ON A PER PATIENT BASIS

Feasibility and potential of transcriptomic analysis using the NanoString nCounter technology to aid the classification of rejection in kidney transplant biopsies

Andrew Stubbs Information

University

Position

Assistant Professor, Erasmus MC

Citations(all)

5027

Citations(since 2020)

2492

Cited By

3657

hIndex(all)

35

hIndex(since 2020)

28

i10Index(all)

75

i10Index(since 2020)

52

Email

University Profile Page

Erasmus Universiteit Rotterdam

Google Scholar

View Google Scholar Profile

Andrew Stubbs Skills & Research Interests

bioinoformatics

ngs

tumor biology

statisical pathways

genetics

Top articles of Andrew Stubbs

Title

Journal

Author(s)

Publication Date

Reproducible Exploration of Disease Maps with Galaxy Workflows and the MINERVA Platform

Helena Rasche

Matti Hoch

Julia Scheel

Saskia Hiltemann

Martina Kutmon

...

2024/3/20

FAIR data retrieval for sensitive clinical research data in Galaxy

GigaScience

Jasper Ouwerkerk

Helena Rasche

John D Spalding

Saskia Hiltemann

Andrew P Stubbs

2024

The heterogeneous sensitivity of pediatric brain tumors to different oncolytic viruses is predicted by unique gene expression profiles

Molecular Therapy Oncology

Konstantinos Vazaios

Εftychia Stavrakaki

Lisette B Vogelezang

Jie Ju

Piotr Waranecki

...

2024/4/15

Multiomic profiling of transplant glomerulopathy reveals a novel T-cell dominant subclass

Kidney International

Iacopo Cristoferi

Hilal Varol

Myrthe van Baardwijk

Layla Rahiem

Karishma A Lila

...

2024/4/1

Training infrastructure as a service

GigaScience

Helena Rasche

Cameron Hyde

John Davis

Simon Gladman

Nate Coraor

...

2023

Artificial Intelligence in Digital Pathology for Bladder Cancer: Hype or Hope? A Systematic Review

Farbod Khoraminia

Saul Fuster

Neel Kanwal

Mitchell Olislagers

Kjersti Engan

...

2023/9/12

P10. 23. AA PATIENT-DERIVED FUNCTIONAL GBM DRUG SCREEN OFFERS A TOOL TO PREDICT TMZ RESPONSE AND ASSESS SENSITIVITY TO CANDIDATE TREATMENTS ON A PER PATIENT BASIS

Neuro-Oncology

I Ntafoulis

A Kleijn

C Posthoorn-Verheul

S Koolen

K Jimenez-Cowell

...

2023/9/1

Feasibility and potential of transcriptomic analysis using the NanoString nCounter technology to aid the classification of rejection in kidney transplant biopsies

Transplantation

Hilal Varol

Angela Ernst

Iacopo Cristoferi

Wolfgang Arns

Carla C Baan

...

2023/4/1

Artificial intelligence-based recurrence prediction outperforms classical histopathological methods in pulmonary adenocarcinoma biopsies

Lung Cancer

F Akram

Janina Luisa Wolf

TE Trandafir

Anne-Marie C Dingemans

AP Stubbs

...

2023/12/1

The value of prognostic and predictive parameters in early-stage lung adenocarcinomas: A comparison between biopsies and resections

Lung Cancer

JL Wolf

TE Trandafir

F Akram

ER Andrinopoulou

AWPM Maat

...

2023/2/1

MODL-36. EX VIVO GSC CULTURES RETAIN PATIENT-UNIQUE HALLMARK GENE EXPRESSIONS AND PREDICT PATIENT RESPONSE TO TMZ MORE SPECIFICALLY THAN MGMT PROMOTER STATUS

Neuro-Oncology

Ioannis Ntafoulis

Anne Kleijn

Jie Ju

Kevin Jimenez-Cowell

Federica Fabro

...

2023/11/1

Spatial genomics reveals a high number and specific location of B cells in the pancreatic ductal adenocarcinoma microenvironment of long-term survivors

Frontiers in immunology

Hosein M Aziz

Lawlaw Saida

Willem de Koning

Andrew P Stubbs

Yunlei Li

...

2023/1/4

Ex vivo drug sensitivity screening predicts response to temozolomide in glioblastoma patients and identifies candidate biomarkers

British Journal of Cancer

Ioannis Ntafoulis

Anne Kleijn

Jie Ju

Kevin Jimenez-Cowell

Federica Fabro

...

2023/10/12

A decentralized kidney transplant biopsy classifier for transplant rejection developed using genes of the Banff-human organ transplant panel

Frontiers in Immunology

Myrthe van Baardwijk

Iacopo Cristoferi

Jie Ju

Hilal Varol

Robert C Minnee

...

2022/5/10

Immunomodulatory Effects of Stereotactic Body Radiotherapy and Vaccination with Heat-Killed Mycobacterium Obuense (IMM-101) in Patients with Locally Advanced Pancreatic Cancer

Cancers

Freek R van ‘t Land

Sai P Lau

Willem de Koning

Larissa Klaase

Madelief Vink

...

2022/10/27

The diagnostic value of nasal microbiota and clinical parameters in a multi-parametric prediction model to differentiate bacterial versus viral infections in lower respiratory …

Plos one

Yunlei Li

Chantal B van Houten

Stefan A Boers

Ruud Jansen

Asi Cohen

...

2022/4/18

Deciphering imprints of impaired memory B-cell maturation in germinal centers of three patients with common variable immunodeficiency

Frontiers in immunology

Pauline Van Schouwenburg

Susanne Unger

Kathryn J Payne

Fabian MP Kaiser

Ingrid Pico-Knijnenburg

...

2022/10/6

Deciphering tumour microenvironment of liver cancer through deconvolution of bulk RNA-seq data with single-cell atlas

Cancers

Shaoshi Zhang

Wendi Bacon

Maikel P Peppelenbosch

Folkert van Kemenade

Andrew Peter Stubbs

2022/12/27

FAIR Genomes metadata schema promoting Next Generation Sequencing data reuse in Dutch healthcare and research

Scientific data

K Joeri van der Velde

Gurnoor Singh

Rajaram Kaliyaperumal

XiaoFeng Liao

Sander de Ridder

...

2022/4/13

315.10: Gene Expression Patterns After 2 Hours of Normothermic Ex-vivo Kidney Perfusion Potentially Predict Occurrence of Future Acute Rejection: A Preliminary Analysis

Transplantation

Iacopo Cristoferi

Elsaline Rijkse

Sarah Bouari

Myrthe Van Baardwijk

Dana AM Mustafa

...

2022/9/1

See List of Professors in Andrew Stubbs University(Erasmus Universiteit Rotterdam)