Andrew Doxey

Andrew Doxey

University of Waterloo

H-index: 35

North America-Canada

About Andrew Doxey

Andrew Doxey, With an exceptional h-index of 35 and a recent h-index of 28 (since 2020), a distinguished researcher at University of Waterloo, specializes in the field of Computational Biology, Bioinformatics, microbial genomics, protein evolution, toxins.

His recent articles reflect a diverse array of research interests and contributions to the field:

Evaluation of multiple displacement amplification for metagenomic analysis of low biomass samples

AnnoView enables large-scale analysis, comparison, and visualization of microbial gene neighborhoods

Characterization of CXCL10 as a biomarker of respiratory tract infections detectable by open-source lateral flow immunoassay

Nasopharyngeal metatranscriptomics reveals host-pathogen signatures of pediatric sinusitis

Cannabis Smoke Exposure Hinders Viral Clearance and Suppresses Immune Responses to Influenza A Infection in Mice

Genomic classification and antimicrobial resistance profiling of Streptococcus pneumoniae and Haemophilus influenzae isolates associated with paediatric otitis media and upper …

Comparative analysis of adenylate isopentenyl transferase genes in plant growth-promoting bacteria and plant pathogenic bacteria

Ancient Clostridium DNA and variants of tetanus neurotoxins associated with human archaeological remains

Andrew Doxey Information

University

Position

Associate Professor

Citations(all)

3262

Citations(since 2020)

2498

Cited By

1637

hIndex(all)

35

hIndex(since 2020)

28

i10Index(all)

54

i10Index(since 2020)

52

Email

University Profile Page

University of Waterloo

Google Scholar

View Google Scholar Profile

Andrew Doxey Skills & Research Interests

Computational Biology

Bioinformatics

microbial genomics

protein evolution

toxins

Top articles of Andrew Doxey

Title

Journal

Author(s)

Publication Date

Evaluation of multiple displacement amplification for metagenomic analysis of low biomass samples

ISME communications

Melody Cabrera Ospino

Katja Engel

Santiago Ruiz-Navas

W Jeffrey Binns

Andrew C Doxey

...

2024/1/1

AnnoView enables large-scale analysis, comparison, and visualization of microbial gene neighborhoods

bioRxiv

Xin Wei

Huagang Tan

Briallen Lobb

William Zhen

Zijing Wu

...

2024

Characterization of CXCL10 as a biomarker of respiratory tract infections detectable by open-source lateral flow immunoassay

medRxiv

Dayna Mikkelsen

Jennifer A Aguiar

Benjamin JM Tremblay

Manjot S Hunjan

Ulrich Eckhard

...

2024

Nasopharyngeal metatranscriptomics reveals host-pathogen signatures of pediatric sinusitis

medRxiv

Nooran AbuMazen

Vivian Chu

Manjot Hunjan

Briallen Lobb

Sojin Lee

...

2024

Cannabis Smoke Exposure Hinders Viral Clearance and Suppresses Immune Responses to Influenza A Infection in Mice

N Milad

M Fantauzzi

J McGrath

SP Cass

D Thayaparan

...

2023/5

Genomic classification and antimicrobial resistance profiling of Streptococcus pneumoniae and Haemophilus influenzae isolates associated with paediatric otitis media and upper …

BMC Infectious Diseases

Briallen Lobb

Matthew C Lee

Christi L McElheny

Yohei Doi

Kristin Yahner

...

2023/9/13

Comparative analysis of adenylate isopentenyl transferase genes in plant growth-promoting bacteria and plant pathogenic bacteria

Heliyon

Xin Wei

Gabriel Moreno-Hagelsieb

Bernard R Glick

Andrew C Doxey

2023/3/1

Ancient Clostridium DNA and variants of tetanus neurotoxins associated with human archaeological remains

Nature Communications

Harold P Hodgins

Pengsheng Chen

Briallen Lobb

Xin Wei

Benjamin JM Tremblay

...

2023/9/6

Phylogenomic Analysis of 155 Helminth Species Reveals Widespread Absence of Oxygen Metabolic Capacity

Genome Biology and Evolution

Emma Collington

Briallen Lobb

Nooran Abu Mazen

Andrew C Doxey

D Moira Glerum

2023/8

Identification of a botulinum neurotoxin-like gene cluster in Bacillus toyonensis

bioRxiv

Xin Wei

Briallen Lobb

Kang Wang

Min Dong

Andrew C Doxey

2023

A Machine Learning Framework Identifies Plastid-Encoded Proteins Harboring C3 and C4 Distinguishing Sequence Information

Genome Biology and Evolution

Nilanth Yogadasan

Andrew C Doxey

Simon DX Chuong

2023/7

Genomic and transcriptomic characterization of Delta SARS-CoV-2 infection in free-ranging white-tailed deer (Odocoileus virginianus)

Iscience

Jonathon D Kotwa

Briallen Lobb

Ariane Massé

Marianne Gagnier

Patryk Aftanas

...

2023/11/17

Functional Profiling and Evolutionary Analysis of a Marine Microalgal Virus Pangenome

Viruses

Briallen Lobb

Anson Shapter

Andrew C Doxey

Jozef I Nissimov

2023/5/5

Cannabis smoke suppresses antiviral immune responses to influenza A in mice

ERJ Open Research

Nadia Milad

Matthew F Fantauzzi

Joshua JC McGrath

Steven P Cass

Danya Thayaparan

...

2023/11/1

Endogenous CRISPR-Cas Systems in Group I Clostridium botulinum and Clostridium sporogenes Do Not Directly Target the Botulinum Neurotoxin Gene Cluster

Frontiers in microbiology

Travis G Wentz

Benjamin JM Tremblay

Marite Bradshaw

Andrew C Doxey

Shashi K Sharma

...

2022

Glutamine metabolism mediates sensitivity to respiratory complex II inhibition in acute myeloid leukemia

Molecular Cancer Research

Alessia Roma

Matthew Tcheng

Nawaz Ahmed

Sarah Walker

Preethi Jayanth

...

2022/11/3

Intronic regulation of SARS-CoV-2 receptor (ACE2) expression mediated by immune signaling and oxidative stress pathways

Iscience

Daniel Richard

Pushpanathan Muthuirulan

Jennifer Aguiar

Andrew C Doxey

Arinjay Banerjee

...

2022/7/15

“From Protein Toxins to Applied Toxicological Testing” virtual workshop identifies the need for a bioinformatic framework to assess novel food protein safety

Regulatory Toxicology and Pharmacology

Patricia A Bauman

Andrew C Doxey

Ivano Eberini

Emir Islamovic

Florence Jungo

...

2022/6/1

Structures of distant diphtheria toxin homologs reveal functional determinants of an evolutionarily conserved toxin scaffold

Communications Biology

Seiji N Sugiman-Marangos

Shivneet K Gill

Michael J Mansfield

Kathleen E Orrell

Andrew C Doxey

...

2022/4/19

Identification and characterization of a novel peptide from rainbow trout (Oncorhynchus mykiss) with antimicrobial activity against Streptococcus iniae

Developmental & Comparative Immunology

Joseph FA Varga

Sascha R Brunner

Grant Cheng

Daniel Min

Marc G Aucoin

...

2022/8/28

See List of Professors in Andrew Doxey University(University of Waterloo)

Co-Authors

H-index: 57
Josh D. Neufeld

Josh D. Neufeld

University of Waterloo

H-index: 46
Trevor Charles

Trevor Charles

University of Waterloo

H-index: 38
Brendan McConkey

Brendan McConkey

University of Waterloo

H-index: 38
Gabriel Moreno-Hagelsieb

Gabriel Moreno-Hagelsieb

Wilfrid Laurier University

H-index: 35
Jeremy Hirota

Jeremy Hirota

McMaster University

H-index: 34
Min Dong

Min Dong

Harvard University

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