Andrej Benjak

Andrej Benjak

Universität Bern

H-index: 27

Europe-Switzerland

About Andrej Benjak

Andrej Benjak, With an exceptional h-index of 27 and a recent h-index of 21 (since 2020), a distinguished researcher at Universität Bern, specializes in the field of Bioinformatics, Next-generation sequencing, Genomics, Cancer.

His recent articles reflect a diverse array of research interests and contributions to the field:

Androgen receptor-negative prostate cancer is vulnerable to SWI/SNF-targeting degrader molecules

DNA methylation landscapes of prostate cancer brain metastasis are shaped by early driver genetic alterations

PipeIT2: a tumor-only somatic variant calling workflow for molecular diagnostic ion torrent sequencing data

Siglec-7 represents a glyco-immune checkpoint for non-exhausted effector memory CD8+ T cells with high functional and metabolic capacities

Gene expression patterns associated with multidrug therapy in multibacillary leprosy

Circulating cell-free DNA captures the intratumor heterogeneity in multinodular hepatocellular carcinoma

A new paradigm for leprosy diagnosis based on host gene expression

Patient-derived xenografts and organoids model therapy response in prostate cancer

Andrej Benjak Information

University

Position

Switzerland

Citations(all)

3504

Citations(since 2020)

2102

Cited By

2243

hIndex(all)

27

hIndex(since 2020)

21

i10Index(all)

42

i10Index(since 2020)

34

Email

University Profile Page

Universität Bern

Google Scholar

View Google Scholar Profile

Andrej Benjak Skills & Research Interests

Bioinformatics

Next-generation sequencing

Genomics

Cancer

Top articles of Andrej Benjak

Title

Journal

Author(s)

Publication Date

Androgen receptor-negative prostate cancer is vulnerable to SWI/SNF-targeting degrader molecules

bioRxiv

Phillip D Thienger

Philip D Rubin

Xiaosai Yao

Andrej Benjak

Sagar Shah

...

2024

DNA methylation landscapes of prostate cancer brain metastasis are shaped by early driver genetic alterations

Cancer research

John Gallon

Antonio Rodriguez-Calero

Andrej Benjak

Dilara Akhoundova

Sina Maletti

...

2023/4/14

PipeIT2: a tumor-only somatic variant calling workflow for molecular diagnostic ion torrent sequencing data

Genomics

Desiree Schnidrig

Andrea Garofoli

Andrej Benjak

Gunnar Rätsch

Mark A Rubin

...

2023/3/1

Siglec-7 represents a glyco-immune checkpoint for non-exhausted effector memory CD8+ T cells with high functional and metabolic capacities

Frontiers in immunology

Quentin Haas

Nikita Markov

Lukas Muerner

Viviana Rubino

Andrej Benjak

...

2022/9/23

Gene expression patterns associated with multidrug therapy in multibacillary leprosy

Frontiers in Cellular and Infection Microbiology

Helen Ferreira

Thyago Leal-Calvo

Mayara Abud Mendes

Charlotte Avanzi

Philippe Busso

...

2022/7/22

Circulating cell-free DNA captures the intratumor heterogeneity in multinodular hepatocellular carcinoma

JCO precision oncology

Mairene Coto-Llerena

Andrej Benjak

John Gallon

Marie-Anne Meier

Tuyana Boldanova

...

2022/3

A new paradigm for leprosy diagnosis based on host gene expression

PLoS pathogens

Thyago Leal-Calvo

Charlotte Avanzi

Mayara Abud Mendes

Andrej Benjak

Philippe Busso

...

2021/10/25

Patient-derived xenografts and organoids model therapy response in prostate cancer

Nature communications

Sofia Karkampouna

Federico La Manna

Andrej Benjak

Mirjam Kiener

Marta De Menna

...

2021/2/18

Elimination of PknL and MSMEG_4242 in Mycobacterium smegmatis alters the character of the outer cell envelope and selects for mutations in Lsr2

The Cell Surface

Estalina Báez-Ramírez

Luis Querales

Carlos Andres Aranaga

Gustavo López

Elba Guerrero

...

2021/12/1

Leprosy in wild chimpanzees

Nature

Kimberley J Hockings

Benjamin Mubemba

Charlotte Avanzi

Kamilla Pleh

Ariane Düx

...

2021/10

Genomic Characterization of Mycobacterium leprae to Explore Transmission Patterns Identifies New Subtype in Bangladesh

Frontiers in microbiology

Maria Tió-Coma

Charlotte Avanzi

Els M Verhard

Louise Pierneef

Anouk Van Hooij

...

2020/6/16

Population Genomics of Mycobacterium leprae Reveals a New Genotype in Madagascar and the Comoros

Frontiers in microbiology

Charlotte Avanzi

Emmanuel Lécorché

Fetra Angelot Rakotomalala

Andrej Benjak

Fahafahantsoa Rapelanoro Rabenja

...

2020/5/11

Detection of new Mycobacterium leprae subtype in Bangladesh by genomic characterization to explore transmission patterns

medRxiv

Maria Tió-Coma

Charlotte Avanzi

Els M Verhard

Louise Pierneef

Anouk van Hooij

...

2020/3/6

Multicenter analysis of sputum microbiota in tuberculosis patients

PLoS One

Claudia Sala

Andrej Benjak

Delia Goletti

Sayera Banu

Jesica Mazza-Stadler

...

2020/10/12

New 2-Ethylthio-4-methylaminoquinazoline derivatives inhibiting two subunits of cytochrome bc1 in Mycobacterium tuberculosis

PLoS pathogens

Andréanne Lupien

Caroline Shi-Yan Foo

Svetlana Savina

Anthony Vocat

Jérémie Piton

...

2020/1/23

6,11-Dioxobenzo[f]pyrido[1,2-a]indoles Kill Mycobacterium tuberculosis by Targeting Iron–Sulfur Protein Rv0338c (IspQ), A Putative Redox Sensor

ACS infectious diseases

Rita Székely

Monica Rengifo-Gonzalez

Vinayak Singh

Olga Riabova

Andrej Benjak

...

2020/9/15

Emergence of Mycobacterium leprae rifampin resistance evaluated by whole-genome sequencing after 48 years of irregular treatment

Antimicrobial agents and chemotherapy

Charlotte Avanzi

Raquel Cristina Maia

Andrej Benjak

José Augusto Nery

Anna Maria Sales

...

2020/6/23

See List of Professors in Andrej Benjak University(Universität Bern)