Alexandru I. Tomescu
Helsingin yliopisto
H-index: 19
Europe-Finland
Top articles of Alexandru I. Tomescu
Title | Journal | Author(s) | Publication Date |
|---|---|---|---|
cloudrnaSPAdes: isoform assembly using bulk barcoded RNA sequencing data | Bioinformatics | Dmitry Meleshko Andrey D Prjbelski Mikhail Raiko Alexandru I Tomescu Hagen Tilgner | 2024/2/1 |
ACM Transactions on | ACM Transactions on | Edith Cohen Susanne Albers Glencora Borradaile Andrei A Bulatov Keren Censor-Hillel | 2023 |
Simplicity in Eulerian circuits: Uniqueness and safety | Information Processing Letters | Nidia Obscura Acosta Alexandru I Tomescu | 2024/1/1 |
Width helps and hinders splitting flows | ACM Transactions on Algorithms | Manuel Cáceres Massimo Cairo Andreas Grigorjew Shahbaz Khan Brendan Mumey | 2024/3/13 |
Sensitive inference of alignment-safe intervals from biodiverse protein sequence clusters using EMERALD | Genome Biology | Andreas Grigorjew Artur Gynter Fernando HC Dias Benjamin Buchfink Hajk-Georg Drost | 2023/7/17 |
Accurate Flow Decomposition via Robust Integer Linear Programming | bioRxiv | Fernando HC Dias Alexandru I Tomescu | 2023 |
A safety framework for flow decomposition problems via integer linear programming | Bioinformatics | Fernando HC Dias Manuel Caceres Lucia Williams Brendan Mumey Alexandru I Tomescu | 2023/11/1 |
Extremely fast construction and querying of compacted and colored de Bruijn graphs with GGCAT | Genome Research | Andrea Cracco Alexandru I Tomescu | 2023/7/1 |
Genome-Scale Algorithm Design: Bioinformatics in the Era of High-Throughput Sequencing | Veli Mäkinen Djamal Belazzougui Fabio Cunial Alexandru I Tomescu | 2023/10/12 | |
Matchtigs: minimum plain text representation of k-mer sets | Genome Biology | Sebastian Schmidt Shahbaz Khan Jarno N Alanko Giulio E Pibiri Alexandru I Tomescu | 2023/6/9 |
Graphs cannot be indexed in polynomial time for sub-quadratic time string matching, unless SETH fails | Theoretical Computer Science | Massimo Equi Veli Mäkinen Alexandru I Tomescu | 2023/10/9 |
Algorithms and complexity on indexing founder graphs | Algorithmica | Massimo Equi Tuukka Norri Jarno Alanko Bastien Cazaux Alexandru I Tomescu | 2023/6 |
Genome Assembly, from Practice to Theory: Safe, Complete and Linear-Time | ACM Transactions on Algorithms | Massimo Cairo Romeo Rizzi Alexandru I Tomescu Elia C Zirondelli | 2023/12/11 |
Minimum Path Cover: The Power of Parameterization | arXiv preprint arXiv:2308.08960 | Manuel Cáceres Brendan Mumey Santeri Toivonen Alexandru I Tomescu | 2023/8/17 |
On the complexity of string matching for graphs | ACM Transactions on Algorithms | Massimo Equi Veli Mäkinen Alexandru I Tomescu Roberto Grossi | 2023/4/12 |
Accelerating ILP solvers for Minimum Flow Decompositions through search space and dimensionality reductions | arXiv preprint arXiv:2311.10563 | Andreas Grigorjew Fernando HC Dias Andrea Cracco Romeo Rizzi Alexandru I Tomescu | 2023/11/17 |
Chaining for accurate alignment of erroneous long reads to acyclic variation graphs | Bioinformatics | Jun Ma Manuel Cáceres Leena Salmela Veli Mäkinen Alexandru I Tomescu | 2023/8/1 |
The omnitig framework can improve genome assembly contiguity in practice | bioRxiv | Sebastian Schmidt Santeri Toivonen Paul Medvedev Alexandru I Tomescu | 2023/2/2 |
Flowtigs: safety in flow decompositions for assembly graphs | bioRxiv | Francisco Sena Eliel Ingervo Shahbaz Khan Andrey Prjibelski Sebastian Schmidt | 2023/11/17 |
Solving string problems on graphs using the labeled direct product | Algorithmica | Nicola Rizzo Alexandru I Tomescu Alberto Policriti | 2022/10 |
Co-Authors
