Alexander Baras

Alexander Baras

Johns Hopkins University

H-index: 41

North America-United States

About Alexander Baras

Alexander Baras, With an exceptional h-index of 41 and a recent h-index of 31 (since 2020), a distinguished researcher at Johns Hopkins University, specializes in the field of Computational Pathology, Molecular Pathology, Bioinformatics, Urologic and Gynecologic Pathology.

His recent articles reflect a diverse array of research interests and contributions to the field:

Association between pathologic response and survival after neoadjuvant therapy in lung cancer

The Journey to Improve the College of American Pathologists Cancer Biomarker Reporting Protocols

Characterization of non-monotonic relationships between tumor mutational burden and clinical outcomes

Multiple-instance learning of somatic mutations for the classification of tumour type and the prediction of microsatellite status

Sparse Multi-Modal Graph Transformer With Shared-Context Processing for Representation Learning of Giga-Pixel Images

Precision Oncology Core Data Model to Support Clinical Genomics Decision Making

1511 Pan-tumor harmonization of pathologic response assessment for standardized data collection in neoadjuvant IO trials (PATHdata): Interim analysis of a multi-institutional …

Probabilistic mixture models improve calibration of panel-derived tumor mutational burden in the context of both tumor-normal and tumor-only sequencing

Alexander Baras Information

University

Position

Associate Professor of Pathology

Citations(all)

6428

Citations(since 2020)

4771

Cited By

2886

hIndex(all)

41

hIndex(since 2020)

31

i10Index(all)

84

i10Index(since 2020)

73

Email

University Profile Page

Johns Hopkins University

Google Scholar

View Google Scholar Profile

Alexander Baras Skills & Research Interests

Computational Pathology

Molecular Pathology

Bioinformatics

Urologic and Gynecologic Pathology

Top articles of Alexander Baras

Title

Journal

Author(s)

Publication Date

Association between pathologic response and survival after neoadjuvant therapy in lung cancer

Nature medicine

Julie Stein Deutsch

Ashley Cimino-Mathews

Elizabeth Thompson

Mariano Provencio

Patrick M Forde

...

2024/1

The Journey to Improve the College of American Pathologists Cancer Biomarker Reporting Protocols

Archives of Pathology & Laboratory Medicine

Brett Baskovich

Alexander Baras

Raja R Seethala

Patrick L Fitzgibbons

Frank Schneider

...

2024/2/20

Characterization of non-monotonic relationships between tumor mutational burden and clinical outcomes

bioRxiv

Jordan Anaya

Julia Kung

Alexander S Baras

2024

Multiple-instance learning of somatic mutations for the classification of tumour type and the prediction of microsatellite status

Nature biomedical engineering

Jordan Anaya

John-William Sidhom

Faisal Mahmood

Alexander S Baras

2024/1

Sparse Multi-Modal Graph Transformer With Shared-Context Processing for Representation Learning of Giga-Pixel Images

Ramin Nakhli

Puria Azadi Moghadam

Haoyang Mi

Hossein Farahani

Alexander Baras

...

2023

Precision Oncology Core Data Model to Support Clinical Genomics Decision Making

JCO Clinical Cancer Informatics

Taxiarchis Botsis

Joseph C Murray

Paola Ghanem

Archana Balan

Alexander Kernagis

...

2023/4

1511 Pan-tumor harmonization of pathologic response assessment for standardized data collection in neoadjuvant IO trials (PATHdata): Interim analysis of a multi-institutional …

Julie S Deutsch

Tricia Cottrell

Krista Chen

Carlos E de Andrea

Pierre-Olivier Fiset

...

2023/11/1

Probabilistic mixture models improve calibration of panel-derived tumor mutational burden in the context of both tumor-normal and tumor-only sequencing

Cancer Research Communications

Jordan Anaya

John-William Sidhom

Craig A Cummings

Alexander S Baras

AACR Project GENIE Consortium

2023/3/28

222-N Analysis of pathologic features and efficacy outcomes with neoadjuvant nivolumab plus platinum-doublet chemotherapy for resectable non-small cell lung cancer in CheckMate 816

Julie Stein Deutsch

Ashley Cimino-Mathews

Elizabeth Thompson

Mariano Provencio

Patrick M Forde

...

2023/11/1

AMIGO: Sparse Multi-Modal Graph Transformer with Shared-Context Processing for Representation Learning of Giga-pixel Images

arXiv preprint arXiv:2303.00865

Ramin Nakhli

Puria Azadi Moghadam

Haoyang Mi

Hossein Farahani

Alexander Baras

...

2023/3/1

A deep learning model to triage and predict adenocarcinoma on pancreas cytology whole slide imaging

Scientific reports

Andrew Sohn

Daniel Miller

Efrain Ribeiro

Nakul Shankar

Syed Ali

...

2023/10/2

Placental bands on MRI in the setting of placenta accreta spectrum: Case report with radiologic-pathologic correlation

Radiology Case Reports

Robert Weinstein

Arthur Vaught

Alexander Baras

Erin Gomez

2023/2/1

Weakly Supervised AI for Efficient Analysis of 3D Pathology Samples

arXiv preprint arXiv:2307.14907

Andrew H Song

Mane Williams

Drew FK Williamson

Guillaume Jaume

Andrew Zhang

...

2023/7/27

Improved bladder cancer antitumor efficacy with a recombinant BCG that releases a STING agonist

bioRxiv

Peter K Um

Monali Praharaj

Kara A Lombardo

Takahiro Yoshida

Andres Matoso

...

2023

A phase 1 trial of durvalumab in combination with bacillus Calmette-Guerin (BCG) or external beam radiation therapy in patients with BCG-unresponsive non-muscle-invasive …

European urology

Noah M Hahn

Michael A O'Donnell

Jason A Efstathiou

Marianna Zahurak

Gary L Rosner

...

2023/6/1

Programmed Death Ligand 1 (PD-L1) as a Therapeutic Target in Gestational Trophoblastic Neoplasia (GTN)(098)

Gynecologic Oncology

Kate Dugan

Ruoxi Yu

Deyin Xing

Brigitte Ronnett

James Ferriss

...

2022/8/1

TOWARDS SEMANTIC ENCODING IN DIGITAL PATHOLOGY USING WEAKLY SUPERVISED LEARNING STRATEGIES

Journal of Pathology Informatics

Alexander Baras

Eitan Halper-Stromberg

2022/1/1

Genomic Landscapes and Hallmarks of Mutant RAS in Human Cancers

Cancer research

Robert B Scharpf

Archana Balan

Biagio Ricciuti

Jacob Fiksel

Christopher Cherry

...

2022/11/2

PD53-01 MOLECULAR SUBTYPING OF N-METHYL-N-NITROSOUREA (MNU) RAT MODEL OF UROTHELIAL CARCINOMA REVEALS BOTH LUMINAL AND BASAL SIGNATURES

The Journal of Urology

Kara Lombardo

Takahiro Yoshida

Kate Fitzgerald

Kate Johnson

David McConkey

...

2022/5

A Random Forest Genomic Classifier for Tumor Agnostic Prediction of Response to Anti-PD1 Immunotherapy

Cancer informatics

Emma Bigelow

Suchi Saria

Brian Piening

Brendan Curti

Alexa Dowdell

...

2022/11

See List of Professors in Alexander Baras University(Johns Hopkins University)

Co-Authors

H-index: 175
Jonathan Epstein

Jonathan Epstein

Johns Hopkins University

H-index: 168
Andrew Pardoll

Andrew Pardoll

Johns Hopkins University

H-index: 95
Robert A. Anders

Robert A. Anders

Johns Hopkins University

H-index: 67
Mohamad Allaf

Mohamad Allaf

Johns Hopkins University

H-index: 47
Ashley Cimino-Mathews

Ashley Cimino-Mathews

Johns Hopkins University

H-index: 36
Mehrbod Som Javadi

Mehrbod Som Javadi

Johns Hopkins University

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