Alan P Boyle
University of Michigan
H-index: 35
North America-United States
Top articles of Alan P Boyle
Title | Journal | Author(s) | Publication Date |
|---|---|---|---|
Enhanced LPS-induced Lung Injury in Survivors of Murine Sepsis Is Mediated by Reprogramming of Ly6CHi Monocytes | SJ Denstaedt B McBean BH Singer A Boyle M Newstead | 2024/5 | |
HaplotagLR: An efficient and configurable utility for haplotagging long reads | Plos one | Monica J Holmes Babak Mahjour Christopher P Castro Gregory A Farnum Adam G Diehl | 2024/3/13 |
CAGI, the Critical Assessment of Genome Interpretation, establishes progress and prospects for computational genetic variant interpretation methods | Null Null Shantanu Jain Constantina Bakolitsa Steven E Brenner Predrag Radivojac | 2024 | |
Enhancing Portability of Trans-Ancestral Polygenic Risk Scores through Tissue-Specific Functional Genomic Data Integration | bioRxiv | Bradley Crone Alan P Boyle | 2024 |
Annotating and prioritizing human non-coding variants with RegulomeDB v. 2 | Nature Genetics | Shengcheng Dong Nanxiang Zhao Emma Spragins Meenakshi S Kagda Mingjie Li | 2023/4/25 |
Mechanisms of Intrinsic Radioresistance in Breast Cancer Identify Potential Therapeutic Vulnerabilities | International Journal of Radiation Oncology, Biology, Physics | B McBean AR Michmerhuizen K Wilder-Romans B Chandler L Lerner | 2023/10/1 |
Molecular mechanisms of intrinsic radioresistance in breast cancer | Cancer Research | Breanna N McBean Anna R Michmerhuizen Kari Wilder-Romans Benjamin C Chandler Lynn M Lerner | 2023/4/4 |
The Impact of Genomic Variation on Function (IGVF) Consortium | arXiv preprint arXiv:2307.13708 | IGVF Consortium | 2023/7/24 |
Organ-specific prioritization and annotation of non-coding regulatory variants in the human genome | bioRxiv | Nanxiang Zhao Shengcheng Dong Alan P Boyle | 2023 |
Sperm chromatin structure and reproductive fitness are altered by substitution of a single amino acid in mouse protamine 1 | Nature Structural & Molecular Biology | Lindsay Moritz Samantha B Schon Mashiat Rabbani Yi Sheng Ritvija Agrawal | 2023/7/17 |
Explain-seq: an end-to-end pipeline from training to interpretation of sequence-based deep learning models | bioRxiv | Nanxiang Zhao Shuze Wang Qianhui Huang Shengcheng Dong Alan P Boyle | 2023 |
Challenges in screening for de novo noncoding variants contributing to genetically complex phenotypes | Human Genetics and Genomics Advances | Christopher P Castro Adam G Diehl Alan P Boyle | 2023/7/13 |
Multiplexed long-read plasmid validation and analysis using OnRamp | Genome Research | Camille Mumm Melissa L Drexel Torrin L McDonald Adam G Diehl Jessica A Switzenberg | 2023/5/8 |
Systematic investigation of allelic regulatory activity of schizophrenia-associated common variants | Cell Genomics | Jessica C McAfee Sool Lee Jiseok Lee Jessica L Bell Oleh Krupa | 2023/10/11 |
Semplme: A tool for integrating dna methylation effects in transcription factor binding affinity predictions | BMC bioinformatics | Sierra S Nishizaki Alan P Boyle | 2022/12 |
Prioritization of regulatory variants with tissue-specific function in the non-coding regions of human genome | Nucleic acids research | Shengcheng Dong Alan P Boyle | 2022/1/11 |
Quantitative assessment of association between noncoding variants and transcription factor binding | bioRxiv | Ningxin Ouyang Alan P Boyle | 2022 |
Comprehensive enhancer-target gene assignments improve gene set level interpretation of genome-wide regulatory data | Genome Biology | Tingting Qin Christopher Lee Shiting Li Raymond G Cavalcante Peter Orchard | 2022/12 |
Cas9 targeted enrichment of mobile elements using nanopore sequencing | Nature Communications | Torrin L McDonald Weichen Zhou Christopher P Castro Camille Mumm Jessica A Switzenberg | 2021/6/11 |
F-Seq2: improving the feature density based peak caller with dynamic statistics | NAR genomics and bioinformatics | Nanxiang Zhao Alan P Boyle | 2021/3 |
Co-Authors
