Tomasz Kościółek
Uniwersytet Jagiellonski
H-index: 22
Europe-Poland
Top articles of Tomasz Kościółek
Title | Journal | Author(s) | Publication Date |
|---|---|---|---|
Robustness of cancer microbiome signals over a broad range of methodological variation | Oncogene | Gregory D Sepich-Poore Daniel McDonald Evguenia Kopylova Caitlin Guccione Qiyun Zhu | 2024/2/23 |
Microbiome features associated with performance measures in athletic and non-athletic individuals: A case-control study | Plos one | Kinga Humińska-Lisowska Kinga Zielińska Jan Mieszkowski Monika Michałowska-Sawczyn Paweł Cięszczyk | 2024/2/21 |
Sequence-structure-function relationships in the microbial protein universe. | Nature communications | Julia Koehler Leman Pawel Szczerbiak P Douglas Renfrew Vladimir Gligorijevic Daniel Berenberg | 2023/4/26 |
Unveiling reproducible gut microbiome alterations in anxiety: enhanced aromatic amino acid metabolism across cohorts | A Tyakht ND Youngblut S Dauser R Knight P Dorrenstein | 2023/10 | |
Homology Modeling of the G Protein-Coupled Receptors | Stefan Mordalski Tomasz Kościółek | 2023/3/24 | |
Effects of Data Transformation and Model Selection on Feature Importance in Microbiome Classification Data | bioRxiv | Zuzanna Karwowska Oliver Aasmets Estonian Biobank research team Tomasz Kosciolek Elin Org | 2023/9/21 |
Reply to: caution regarding the specificities of pan-cancer microbial structure | bioRxiv | Gregory D Sepich-Poore Evguenia Kopylova Qiyun Zhu Carolina Carpenter Serena Fraraccio | 2023/2/13 |
Healthy microbiome-moving towards functional interpretation | bioRxiv | Kinga Zielińska Klas I Udekwu Witold Rudnicki Alina Frolova Tomasz Kosciolek | 2023/12/5 |
Adaptation to space conditions of novel bacterial species isolated from the International Space Station revealed by functional gene annotations and comparative genome analysis | bioRxiv | Lukasz Michal SZYDLOWSKI Alper Bulbul Anna C Simpson Deniz Ece Kaya Nitin K Singh | 2023 |
Microbiome time series data reveal predictable patterns of change | bioRxiv | Zuzanna Karwowska Paweł Szczerbiak Tomasz Kosciolek | 2023/6/8 |
Gut Microbiome Dynamics and Predictive Value in Hospitalized COVID-19 Patients: A Comparative Analysis of Shallow and Deep Shotgun Sequencing | bioRxiv | Katarzyna Kopera Tomasz Gromowski Witold Wydmański Karolina Skonieczna-Żydecka Agata Muszyńska | 2023/11/30 |
Comprehensive functional annotation of metagenomes and microbial genomes using a deep learning-based method | Msystems | Mary Maranga Pawel Szczerbiak Valentyn Bezshapkin Vladimir Gligorijevic Chris Chandler | 2023/4/27 |
Determinants of the microbiome spatial variability in chronic rhinosinusitis | Rhinology | Joanna Szaleniec Valentyn Bezshapkin Agnieszka Krawczyk Katarzyna Kopera Barbara Zapała | 2023/11/27 |
Deep embeddings to comprehend and visualize microbiome protein space | Scientific Reports | Krzysztof Odrzywolek Zuzanna Karwowska Jan Majta Aleksander Byrski Kaja Milanowska-Zabel | 2022/6/20 |
Treatment with multi-species probiotics changes the functions, not the composition of gut microbiota in postmenopausal women with obesity: a randomized, double-blind, placebo … | Frontiers in Cellular and Infection Microbiology | Mariusz Kaczmarczyk Monika Szulińska Igor Łoniewski Matylda Kręgielska-Narożna Karolina Skonieczna-Żydecka | 2022/3/11 |
Spatial variability of the microbiome in chronic rhinosinusitis is associated with the patients’ clinical characteristics but not with sinus ostia occlusion | bioRxiv | Joanna Szaleniec Valentyn Bezshapkin Agnieszka Krawczyk Katarzyna Kopera Barbara Zapała | 2022/10/3 |
A semiparametric model for between‐subject attributes: Applications to beta‐diversity of microbiome data | Biometrics | J Liu Xinlian Zhang T Chen T Wu T Lin | 2022/9 |
Gut microbiome in serious mental illnesses: A systematic review and critical evaluation | Tanya T Nguyen Hugh Hathaway Tomasz Kosciolek Rob Knight Dilip V Jeste | 2021/8/1 | |
Structure-based protein function prediction using graph convolutional networks | Nature communications | Vladimir Gligorijević P Douglas Renfrew Tomasz Kosciolek Julia Koehler Leman Daniel Berenberg | 2021/5/26 |
Gut microbiome in Schizophrenia: altered functional pathways related to immune modulation and atherosclerotic risk | Brain, behavior, and immunity | Tanya T Nguyen Tomasz Kosciolek Rebecca E Daly Yoshiki Vázquez-Baeza Austin Swafford | 2021/1/1 |
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