Haibo Liu

About Haibo Liu

Haibo Liu, With an exceptional h-index of 14 and a recent h-index of 13 (since 2020), a distinguished researcher at University of Massachusetts Medical School, specializes in the field of Bioinformatics, Genomics, Transcriptomics, Cancer biology, Data Science.

His recent articles reflect a diverse array of research interests and contributions to the field:

Best practices for the ATAC-seq assay and its data analysis

Inflammatory stress-mediated chromatin changes underlie dysfunction in endothelial cells

EZH2 inhibition remodels the inflammatory senescence-associated secretory phenotype to potentiate pancreatic cancer immune surveillance

Integrative profiling of gene expression and chromatin accessibility elucidates specific transcriptional networks in porcine neutrophils

O-linked α2, 3 sialylation defines stem cell populations in breast cancer

Abstract C015: EZH2 inhibition remodels the inflammatory senescence-associated secretory phenotype and promotes immune surveillance in PDAC

scATACpipe: A nextflow pipeline for comprehensive and reproducible analyses of single cell ATAC-seq data

Assessment of DNA methylation in porcine immune cells reveals novel regulatory elements associated with cell-specific gene expression and immune capacity traits

Haibo Liu Information

University

Position

Bioinformatician III MCCB

Citations(all)

1266

Citations(since 2020)

1104

Cited By

453

hIndex(all)

14

hIndex(since 2020)

13

i10Index(all)

19

i10Index(since 2020)

15

Email

University Profile Page

Google Scholar

Haibo Liu Skills & Research Interests

Bioinformatics

Genomics

Transcriptomics

Cancer biology

Data Science

Top articles of Haibo Liu

Best practices for the ATAC-seq assay and its data analysis

2024/1/1

Inflammatory stress-mediated chromatin changes underlie dysfunction in endothelial cells

bioRxiv

2023/10/16

EZH2 inhibition remodels the inflammatory senescence-associated secretory phenotype to potentiate pancreatic cancer immune surveillance

Nature cancer

2023/6

Integrative profiling of gene expression and chromatin accessibility elucidates specific transcriptional networks in porcine neutrophils

Frontiers in Genetics

2023/5/23

O-linked α2, 3 sialylation defines stem cell populations in breast cancer

Science Advances

2022/1/7

Abstract C015: EZH2 inhibition remodels the inflammatory senescence-associated secretory phenotype and promotes immune surveillance in PDAC

Cancer Research

2022/11/15

scATACpipe: A nextflow pipeline for comprehensive and reproducible analyses of single cell ATAC-seq data

Frontiers in Cell and Developmental Biology

2022/9/27

Assessment of DNA methylation in porcine immune cells reveals novel regulatory elements associated with cell-specific gene expression and immune capacity traits

BMC genomics

2022/8/11

Stromal Hippo-YAP signaling in stem cell niche controls intestinal homeostasis

bioRxiv

2022/5/12

Germline Runx1 mutations induce inflammation in hematopoietic stem and progenitor cells and predispose to hematologic malignancies

Blood

2021/11/23

Abstract PO-124: EZH2 blockade overcomes suppression of the proinflammatory senescence-associated secretory phenotype in the pancreas and drives NK cell-mediated pancreatic …

Cancer Research

2021/11/15

Haibo Liu
Haibo Liu

H-Index: 9

Reference transcriptomes of porcine peripheral immune cells created through bulk and single-cell RNA sequencing

Frontiers in genetics

2021/6/23

Integrative profiling of chromatin accessibility and gene expression elucidate specific transcriptional network in porcine neutrophils

The Journal of Immunology

2021/5/1

Characterization of circulating porcine immune cells using single-cell RNA-sequencing and comparison to human datasets

The Journal of Immunology

2021/5/1

Haibo Liu
Haibo Liu

H-Index: 9

dagLogo: An R/Bioconductor package for identifying and visualizing differential amino acid group usage in proteomics data

PLoS One

2020/11/6

OneStopRNAseq: A Web Application for Comprehensive and Efficient Analyses of RNA-Seq Data

Genes

2020/10/2

Changes in H3K27ac at gene regulatory regions in porcine alveolar macrophages following LPS or PolyIC exposure

Frontiers in Genetics

2020/8/20

The ESCRT protein CHMP5 restrains skeletal progenitor cell senescence by preserving endo-lysosomal-mitochondrial network

bioRxiv

2020/8/4

An improved pig reference genome sequence to enable pig genetics and genomics research

Gigascience

2020/6

The transcriptional landscape of porcine peripheral blood immune cells

The Journal of Immunology

2020/5/1

See List of Professors in Haibo Liu University(University of Massachusetts Medical School)

Co-Authors

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