Daisuke Kihara

Daisuke Kihara

Purdue University

H-index: 56

North America-United States

About Daisuke Kihara

Daisuke Kihara, With an exceptional h-index of 56 and a recent h-index of 36 (since 2020), a distinguished researcher at Purdue University, specializes in the field of Protein Bioinformatics, Protein Structure Modeling, Protein Function Prediction, Drug Screening.

His recent articles reflect a diverse array of research interests and contributions to the field:

Outcomes of the EMDataResource Cryo-EM Ligand Modeling Challenge

Expert opinions in protein bioinformatics: 2022

PL-PatchSurfer3: Improved Structure-Based Virtual Screening for Structure Variation Using 3D Zernike Descriptors

DiffModeler: Large Macromolecular Structure Modeling in Low-Resolution Cryo-EM Maps Using Diffusion Model

AFM-RL: Large Protein Complex Docking Using AlphaFold-Multimer and Reinforcement Learning

Deepmainmast: integrated protocol of protein structure modeling for cryo-em with deep learning and structure prediction

A remarkable genetic shift in a transmitted/founder virus broadens antibody responses against HIV-1

GO2Sum: generating human-readable functional summary of proteins from GO terms

Daisuke Kihara Information

University

Position

Professor of Biological Sciences and Computer Science Showalter University Faculty Scholar

Citations(all)

10636

Citations(since 2020)

5154

Cited By

7193

hIndex(all)

56

hIndex(since 2020)

36

i10Index(all)

169

i10Index(since 2020)

127

Email

University Profile Page

Google Scholar

Daisuke Kihara Skills & Research Interests

Protein Bioinformatics

Protein Structure Modeling

Protein Function Prediction

Drug Screening

Top articles of Daisuke Kihara

Expert opinions in protein bioinformatics: 2022

Frontiers in Bioinformatics

2024/1/5

Daisuke Kihara
Daisuke Kihara

H-Index: 30

PL-PatchSurfer3: Improved Structure-Based Virtual Screening for Structure Variation Using 3D Zernike Descriptors

bioRxiv

2024

Daisuke Kihara
Daisuke Kihara

H-Index: 30

DiffModeler: Large Macromolecular Structure Modeling in Low-Resolution Cryo-EM Maps Using Diffusion Model

bioRxiv

2024

AFM-RL: Large Protein Complex Docking Using AlphaFold-Multimer and Reinforcement Learning

bioRxiv

2024

Deepmainmast: integrated protocol of protein structure modeling for cryo-em with deep learning and structure prediction

Nature Methods

2024/1

A remarkable genetic shift in a transmitted/founder virus broadens antibody responses against HIV-1

Elife

2024/4/15

GO2Sum: generating human-readable functional summary of proteins from GO terms

npj Systems Biology and Applications

2024/3/15

Daisuke Kihara
Daisuke Kihara

H-Index: 30

ACC-ViT: Atrous Convolution's Comeback in Vision Transformers

arXiv preprint arXiv:2403.04200

2024/3/7

Ning Yan
Ning Yan

H-Index: 51

Daisuke Kihara
Daisuke Kihara

H-Index: 30

A high-quality blue whale genome, segmental duplications, and historical demography

Molecular Biology and Evolution

2024/3

DAQ-score database and DAQ-refine: Deep-learning-based quality estimation and refinement of cryo-EM-derived protein models

Biophysical Journal

2024/2/8

DeepMainmast and cryoREAD: Protein and DNA/RNA structure modeling for cryo-EM using deep learning

Biophysical Journal

2024/2/8

Assembly of Protein Complexes In and On the Membrane with Predicted Spatial Arrangement Constraints

Journal of Molecular Biology

2024/2/8

Charles Christoffer
Charles Christoffer

H-Index: 8

Daisuke Kihara
Daisuke Kihara

H-Index: 30

Chromosome level genome assembly of the Etruscan shrew Suncus etruscus

Scientific Data

2024/2/7

Daisuke Kihara
Daisuke Kihara

H-Index: 30

PDA-Pred: Predicting the binding affinity of protein-DNA complexes using machine learning techniques and structural features

Methods

2023/5/1

Daisuke Kihara
Daisuke Kihara

H-Index: 30

Heterogeneity in lowe syndrome: mutations affecting the phosphatase domain of ocrl1 differ in impact on enzymatic activity and severity of cellular phenotypes

Biomolecules

2023/3/29

Charles Christoffer
Charles Christoffer

H-Index: 8

Daisuke Kihara
Daisuke Kihara

H-Index: 30

Bioinformatic approaches for characterizing molecular structure and function of food proteins

2023/3/27

深層学習を用いた構造モデリングと評価, その最近の展開

2023/2/28

DAQ-score database: Deep-learning based quality estimation of cryo-EM derived protein models

Biophysical Journal

2023/2/10

Flex-LZerD: Protein docking with extremely large conformational changes

Biophysical Journal

2023/2/10

Charles Christoffer
Charles Christoffer

H-Index: 8

Daisuke Kihara
Daisuke Kihara

H-Index: 30

See List of Professors in Daisuke Kihara University(Purdue University)

Co-Authors

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