Andrew L Ferguson
University of Chicago
H-index: 39
North America-United States
Top articles of Andrew L Ferguson
Assembly of short amphiphilic peptoids into nanohelices with controllable supramolecular chirality
Nature Communications
2024/4/16
Optimizing data-driven learning of system reconstructions from incomplete low-dimensional observables
Bulletin of the American Physical Society
2024/3/3
PySAGES: Flexible, advanced sampling methods accelerated with GPUs
npj Computational Materials
2024/2/14
Ludwig Schneider
H-Index: 7
Riccardo Alessandri
H-Index: 8
Siva Dasetty
H-Index: 4
Andrew L Ferguson
H-Index: 28
Unraveling the effect of chemical patterning on hydrophobicity using machine learning
Biophysical Journal
2024/2/8
Andrew L Ferguson
H-Index: 28
Disruption of energetic and dynamic base-pairing cooperativity in DNA duplexes by an abasic site
Proceedings of the National Academy of Sciences
2023/3/28
Molecular insight into how the position of an abasic site modifies DNA duplex stability and dynamics
Biophysical Journal
2024/1/16
Data-driven molecular design and simulation in modern chemical engineering
Nature Chemical Engineering
2024/1
Andrew L Ferguson
H-Index: 28
New Editor-in-Chief and Deputy Editor-in-Chief for MSDE: reflections and vision
Molecular Systems Design & Engineering
2023
Andrew L Ferguson
H-Index: 28
Data-driven discovery of innate immunomodulators via machine learning-guided high throughput screening
bioRxiv
2023
Maximizing dynamical systems information embedded in experimental observables of molecules through statistical learning enabled Takens reconstruction
APS March Meeting Abstracts
2023
Computational design of self-assembling peptide chassis materials for synthetic cells
Molecular Systems Design & Engineering
2023
Bineet Sharma
H-Index: 2
Andrew L Ferguson
H-Index: 28
Permutationally Invariant Networks for Enhanced Sampling (PINES): Discovery of Multimolecular and Solvent-Inclusive Collective Variables
Journal of Chemical Theory and Computation
2023/12/27
Data-driven prediction of αIIbβ3 integrin activation paths using manifold learning and deep generative modeling
Biophysical Journal
2023/12/14
Siva Dasetty
H-Index: 4
Andrew L Ferguson
H-Index: 28
ProtWave-VAE: Integrating autoregressive sampling with latent-based inference for data-driven protein design
ACS Synthetic Biology
2023/11/21
Data-Driven Discovery of Linear Molecular Probes with Optimal Selective Affinity for PFAS in Water
Journal of Chemical & Engineering Data
2023/11/2
Siva Dasetty
H-Index: 4
Maximilian Topel
H-Index: 0
Yuqin Wang
H-Index: 27
Junhong Chen
H-Index: 3
Andrew L Ferguson
H-Index: 28
DiAMoNDBack: Diffusion-Denoising Autoregressive Model for Non-Deterministic Backmapping of Cα Protein Traces
Journal of Chemical Theory and Computation
2023/10/31
Kirill Shmilovich
H-Index: 4
Andrew L Ferguson
H-Index: 28
System, method, and computer readable storage medium for auto-regressive wavenet variational autoencoders for alignment-free generative protein design and fitness prediction
2015/10/22
GANs and Closures: Micro-Macro Consistency in Multiscale Modeling
Multiscale Modeling & Simulation
2023/9/30
Andrew L Ferguson
H-Index: 28
Thermodynamics and kinetics of DNA and RNA dinucleotide hybridization to gaps and overhangs
Biophysical Journal
2023/8/22
Thermodynamic Basis for the Stabilization of Helical Peptoids by Chiral Sidechains
The Journal of Physical Chemistry B
2023/6/28
Sarah Alamdari
H-Index: 4
Xiaoqian Wang
H-Index: 6
Andrew L Ferguson
H-Index: 28
Jim Pfaendtner
H-Index: 32
Co-Authors
