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Ziye Wang

About Ziye Wang

Ziye Wang, With an exceptional h-index of 7 and a recent h-index of 7 (since 2020), a distinguished researcher at Fudan University, specializes in the field of metagenomics, bioinformatics, machine learning.

His recent articles reflect a diverse array of research interests and contributions to the field:

Effective binning of metagenomic contigs using contrastive multi-view representation learning

Protein language model powers accurate and fast sequence search for remote homology

MetaBinner: a high-performance and stand-alone ensemble binning method to recover individual genomes from complex microbial communities

Cost-effective methylome sequencing of cell-free DNA for accurately detecting and locating cancer

Critical assessment of metagenome interpretation: the second round of challenges

ARG-SHINE: improve antibiotic resistance class prediction by integrating sequence homology, functional information and deep convolutional neural network

Assessment of metagenomic assemblers based on hybrid reads of real and simulated metagenomic sequences

Ziye Wang Information

University

Position

___

Citations(all)

536

Citations(since 2020)

535

Cited By

62

hIndex(all)

7

hIndex(since 2020)

7

i10Index(all)

6

i10Index(since 2020)

6

Email

University Profile Page

Google Scholar

Ziye Wang Skills & Research Interests

metagenomics

bioinformatics

machine learning

Top articles of Ziye Wang

Effective binning of metagenomic contigs using contrastive multi-view representation learning

Nature Communications

2024/1/17

Ziye Wang
Ziye Wang

H-Index: 3

Ronghui You
Ronghui You

H-Index: 9

Wei Liu
Wei Liu

H-Index: 16

Fengzhu Sun
Fengzhu Sun

H-Index: 35

Protein language model powers accurate and fast sequence search for remote homology

bioRxiv

2023/4/5

Wei Liu
Wei Liu

H-Index: 16

Ziye Wang
Ziye Wang

H-Index: 3

Ronghui You
Ronghui You

H-Index: 9

Hong Wei
Hong Wei

H-Index: 7

Yi Xiong
Yi Xiong

H-Index: 3

Jianyi Yang
Jianyi Yang

H-Index: 25

MetaBinner: a high-performance and stand-alone ensemble binning method to recover individual genomes from complex microbial communities

Genome Biology

2023/1/6

Ziye Wang
Ziye Wang

H-Index: 3

Ronghui You
Ronghui You

H-Index: 9

Fengzhu Sun
Fengzhu Sun

H-Index: 35

Cost-effective methylome sequencing of cell-free DNA for accurately detecting and locating cancer

Nature communications

2022/9/29

Shuo Li
Shuo Li

H-Index: 9

Shanshan He
Shanshan He

H-Index: 10

Ziye Wang
Ziye Wang

H-Index: 3

Fengzhu Sun
Fengzhu Sun

H-Index: 35

Asli Yildirim
Asli Yildirim

H-Index: 4

Yazhen Zhu
Yazhen Zhu

H-Index: 15

Wing Hung Wong
Wing Hung Wong

H-Index: 55

Denise R Aberle
Denise R Aberle

H-Index: 34

Wenyuan Li
Wenyuan Li

H-Index: 2

Critical assessment of metagenome interpretation: the second round of challenges

Nature methods

2022/4

Fernando Meyer
Fernando Meyer

H-Index: 1

David Koslicki
David Koslicki

H-Index: 12

Alexey Gurevich
Alexey Gurevich

H-Index: 17

Dmitry Antipov
Dmitry Antipov

H-Index: 12

Bo Chen
Bo Chen

H-Index: 1

Eleazar Eskin
Eleazar Eskin

H-Index: 58

Lars Hestbjerg Hansen
Lars Hestbjerg Hansen

H-Index: 42

Luiz Irber
Luiz Irber

H-Index: 7

Tue Sparholt Jørgensen
Tue Sparholt Jørgensen

H-Index: 10

Mikhail Kolmogorov
Mikhail Kolmogorov

H-Index: 10

Anton Korobeynikov
Anton Korobeynikov

H-Index: 21

Nathan Lapierre
Nathan Lapierre

H-Index: 3

Chenhao Li
Chenhao Li

H-Index: 12

Serghei Mangul
Serghei Mangul

H-Index: 21

Dmitry Meleshko
Dmitry Meleshko

H-Index: 11

Simon Rasmussen
Simon Rasmussen

H-Index: 47

Knut Reinert
Knut Reinert

H-Index: 34

Varuni Sarwal
Varuni Sarwal

H-Index: 3

Nicola Segata
Nicola Segata

H-Index: 55

Lizhen Shi
Lizhen Shi

H-Index: 4

Fengzhu Sun
Fengzhu Sun

H-Index: 35

Ashleigh Thomas
Ashleigh Thomas

H-Index: 2

Mirko Trajkovski
Mirko Trajkovski

H-Index: 17

Gherman Uritskiy
Gherman Uritskiy

H-Index: 6

Zhengyang Wang
Zhengyang Wang

H-Index: 10

Ziye Wang
Ziye Wang

H-Index: 3

Zhong Wang
Zhong Wang

H-Index: 1

Andrew Warren
Andrew Warren

H-Index: 12

Ronghui You
Ronghui You

H-Index: 9

Jie Zhu
Jie Zhu

H-Index: 5

Alexander Sczyrba
Alexander Sczyrba

H-Index: 30

ARG-SHINE: improve antibiotic resistance class prediction by integrating sequence homology, functional information and deep convolutional neural network

NAR Genomics and Bioinformatics

2021/9/1

Ziye Wang
Ziye Wang

H-Index: 3

Shuo Li
Shuo Li

H-Index: 9

Ronghui You
Ronghui You

H-Index: 9

Fengzhu Sun
Fengzhu Sun

H-Index: 35

Assessment of metagenomic assemblers based on hybrid reads of real and simulated metagenomic sequences

2020/5

Ziye Wang
Ziye Wang

H-Index: 3

Ying Wang
Ying Wang

H-Index: 3

Fengzhu Sun
Fengzhu Sun

H-Index: 35

See List of Professors in Ziye Wang University(Fudan University)