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Yang Joon Kim

Yang Joon Kim

University of California, Berkeley

H-index: 7

North America-United States

Contact Yang Joon Kim

About Yang Joon Kim

Yang Joon Kim, With an exceptional h-index of 7 and a recent h-index of 7 (since 2020), a distinguished researcher at University of California, Berkeley, specializes in the field of single-cell multi-omics, spatial transcriptomics, biophysics.

His recent articles reflect a diverse array of research interests and contributions to the field:

Single-cell and spatial multi-omics highlight effects of anti-integrin therapy across cellular compartments in ulcerative colitis

Concordance of MERFISH spatial transcriptomics with bulk and single-cell RNA sequencing

Zebrahub–multimodal zebrafish developmental atlas reveals the state-transition dynamics of late-vertebrate pluripotent axial progenitors

Single-cell and spatial multi-omics identify innate and stromal modules targeted by anti-integrin therapy in ulcerative colitis.

CZ CELLxGENE Discover: A single-cell data platform for scalable exploration, analysis and modeling of aggregated data

Single-nucleus RNA sequencing provides insights into the GL261-GSC syngeneic mouse model of glioblastoma

Tutorial: guidelines for manual cell type annotation of single-cell multi-omics datasets using interactive software

Predictive modeling reveals that higher-order cooperativity drives transcriptional repression in a synthetic developmental enhancer

Yang Joon Kim Information

University

Position

___

Citations(all)

251

Citations(since 2020)

235

Cited By

54

hIndex(all)

7

hIndex(since 2020)

7

i10Index(all)

7

i10Index(since 2020)

7

Email

University Profile Page

Google Scholar

Yang Joon Kim Skills & Research Interests

single-cell multi-omics

spatial transcriptomics

biophysics

Top articles of Yang Joon Kim

Single-cell and spatial multi-omics highlight effects of anti-integrin therapy across cellular compartments in ulcerative colitis

Nature Communications

2024/2/19

Elvira Mennillo
Elvira Mennillo

H-Index: 7

Yang Joon Kim
Yang Joon Kim

H-Index: 3

Ravi K Patel
Ravi K Patel

H-Index: 10

Alan Shen
Alan Shen

H-Index: 4

Mohammad Naser
Mohammad Naser

H-Index: 2

Walter Eckalbar
Walter Eckalbar

H-Index: 20

Uma Mahadevan
Uma Mahadevan

H-Index: 36

Concordance of MERFISH spatial transcriptomics with bulk and single-cell RNA sequencing

Life Science Alliance

2023/1/1

Jonathan Liu
Jonathan Liu

H-Index: 0

Yang Joon Kim
Yang Joon Kim

H-Index: 3

Snigdha Agarwal
Snigdha Agarwal

H-Index: 1

Ruofan Wang
Ruofan Wang

H-Index: 5

Bruce Wang
Bruce Wang

H-Index: 17

Jiang He
Jiang He

H-Index: 10

Zebrahub–multimodal zebrafish developmental atlas reveals the state-transition dynamics of late-vertebrate pluripotent axial progenitors

bioRxiv

2023/3/7

Alejandro Granados
Alejandro Granados

H-Index: 5

Sreejith Santhosh
Sreejith Santhosh

H-Index: 1

Bin Yang
Bin Yang

H-Index: 4

Xiang Zhao
Xiang Zhao

H-Index: 6

Yang Liu
Yang Liu

H-Index: 18

Robert Haase
Robert Haase

H-Index: 10

Mattia Serra
Mattia Serra

H-Index: 7

Single-cell and spatial multi-omics identify innate and stromal modules targeted by anti-integrin therapy in ulcerative colitis.

BioRxiv

2023/1/22

Elvira Mennillo
Elvira Mennillo

H-Index: 7

Yang Joon Kim
Yang Joon Kim

H-Index: 3

Ravi Patel
Ravi Patel

H-Index: 3

Alan Shen
Alan Shen

H-Index: 4

Mohammad Naser
Mohammad Naser

H-Index: 2

Walter Eckalbar
Walter Eckalbar

H-Index: 20

Uma Mahadevan
Uma Mahadevan

H-Index: 36

David Oh
David Oh

H-Index: 7

Alexis Combes
Alexis Combes

H-Index: 10

CZ CELLxGENE Discover: A single-cell data platform for scalable exploration, analysis and modeling of aggregated data

bioRxiv

2023

Jason Hilton
Jason Hilton

H-Index: 8

Yang Joon Kim
Yang Joon Kim

H-Index: 3

Bruce Martin
Bruce Martin

H-Index: 7

Andrew Shin
Andrew Shin

H-Index: 3

Single-nucleus RNA sequencing provides insights into the GL261-GSC syngeneic mouse model of glioblastoma

bioRxiv

2023

Alejandro Granados
Alejandro Granados

H-Index: 5

Arantxa Tabernero
Arantxa Tabernero

H-Index: 20

Tutorial: guidelines for manual cell type annotation of single-cell multi-omics datasets using interactive software

2023

Yang Joon Kim
Yang Joon Kim

H-Index: 3

Alejandro Granados
Alejandro Granados

H-Index: 5

Predictive modeling reveals that higher-order cooperativity drives transcriptional repression in a synthetic developmental enhancer

Elife

2022/12/12

Yang Joon Kim
Yang Joon Kim

H-Index: 3

Jonathan Liu
Jonathan Liu

H-Index: 0

Stephen J Small
Stephen J Small

H-Index: 18

Optogenetic dissection of transcriptional repression in a multicellular organism

BioRxiv

2022/11/20

Jiaxi Zhao
Jiaxi Zhao

H-Index: 1

Simon Alamos
Simon Alamos

H-Index: 4

Yang Joon Kim
Yang Joon Kim

H-Index: 3

Gabriella Martini
Gabriella Martini

H-Index: 4

A sandbox for prediction and integration of DNA, RNA, and proteins in single cells

2021/8/29

Robrecht Cannoodt
Robrecht Cannoodt

H-Index: 12

Louise Deconinck
Louise Deconinck

H-Index: 1

Yang Joon Kim
Yang Joon Kim

H-Index: 3

Dominik Klein
Dominik Klein

H-Index: 6

Alexander Tong
Alexander Tong

H-Index: 4

Guilin Wang
Guilin Wang

H-Index: 15

Jia Yan
Jia Yan

H-Index: 11

Ce Zhang
Ce Zhang

H-Index: 3

Smita Krishnaswamy
Smita Krishnaswamy

H-Index: 19

Real-time single-cell characterization of the eukaryotic transcription cycle reveals correlations between RNA initiation, elongation, and cleavage

PLOS Computational Biology

2021/5/18

Jonathan Liu
Jonathan Liu

H-Index: 0

Yang Joon Kim
Yang Joon Kim

H-Index: 3

Simon Alamos
Simon Alamos

H-Index: 4

A matter of time: Using dynamics and theory to uncover mechanisms of transcriptional bursting

2020/12/1

Yang Joon Kim
Yang Joon Kim

H-Index: 3

Jiaxi Zhao
Jiaxi Zhao

H-Index: 1

Lighting up the central dogma for predictive developmental biology

2020/1/1

Augusto Berrocal
Augusto Berrocal

H-Index: 3

Yang Joon Kim
Yang Joon Kim

H-Index: 3

Gabriella Martini
Gabriella Martini

H-Index: 4

Jiaxi Zhao
Jiaxi Zhao

H-Index: 1

See List of Professors in Yang Joon Kim University(University of California, Berkeley)