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Marek Kokot

About Marek Kokot

Marek Kokot, With an exceptional h-index of 8 and a recent h-index of 8 (since 2020), a distinguished researcher at Politechnika Slaska, specializes in the field of algorithmics, bioinformatics, parallel computing.

His recent articles reflect a diverse array of research interests and contributions to the field:

Ultra-efficient, unified discovery from microbial sequencing with SPLASH and precise statistical assembly

NOMAD2 provides ultra-efficient, scalable, and unsupervised discovery on raw sequencing reads

The K-mer File Format: a standardized and compact disk representation of sets of k-mers

Scalable, ultra-fast, and low-memory construction of compacted de Bruijn graphs with Cuttlefish 2

CoLoRd: Compressing long reads

VCFShark: how to squeeze a VCF file

Marek Kokot Information

University

Position

___

Citations(all)

820

Citations(since 2020)

635

Cited By

382

hIndex(all)

8

hIndex(since 2020)

8

i10Index(all)

7

i10Index(since 2020)

7

Email

University Profile Page

Google Scholar

Marek Kokot Skills & Research Interests

algorithmics

bioinformatics

parallel computing

Top articles of Marek Kokot

Ultra-efficient, unified discovery from microbial sequencing with SPLASH and precise statistical assembly

bioRxiv

2024

George Henderson
George Henderson

H-Index: 8

Tavor Baharav
Tavor Baharav

H-Index: 3

Marek Kokot
Marek Kokot

H-Index: 5

Sebastian Deorowicz
Sebastian Deorowicz

H-Index: 18

Julia Salzman
Julia Salzman

H-Index: 18

NOMAD2 provides ultra-efficient, scalable, and unsupervised discovery on raw sequencing reads

bioRxiv

2023

Marek Kokot
Marek Kokot

H-Index: 5

Roozbeh Dehghannasiri
Roozbeh Dehghannasiri

H-Index: 9

Julia Salzman
Julia Salzman

H-Index: 18

Sebastian Deorowicz
Sebastian Deorowicz

H-Index: 18

The K-mer File Format: a standardized and compact disk representation of sets of k-mers

Bioinformatics

2022/9/15

Amatur Rahman
Amatur Rahman

H-Index: 3

Marek Kokot
Marek Kokot

H-Index: 5

Paul Medvedev
Paul Medvedev

H-Index: 22

Sebastian Deorowicz
Sebastian Deorowicz

H-Index: 18

Scalable, ultra-fast, and low-memory construction of compacted de Bruijn graphs with Cuttlefish 2

Genome biology

2022/9/8

Jamshed Khan
Jamshed Khan

H-Index: 0

Marek Kokot
Marek Kokot

H-Index: 5

Sebastian Deorowicz
Sebastian Deorowicz

H-Index: 18

Rob Patro
Rob Patro

H-Index: 22

CoLoRd: Compressing long reads

Nature methods

2022/4

Marek Kokot
Marek Kokot

H-Index: 5

Heng Li
Heng Li

H-Index: 8

Sebastian Deorowicz
Sebastian Deorowicz

H-Index: 18

VCFShark: how to squeeze a VCF file

Bioinformatics

2021/10/1

Sebastian Deorowicz
Sebastian Deorowicz

H-Index: 18

Agnieszka Danek
Agnieszka Danek

H-Index: 7

Marek Kokot
Marek Kokot

H-Index: 5

See List of Professors in Marek Kokot University(Politechnika Slaska)

Co-Authors

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