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Luiz Irber

Luiz Irber

University of California, Davis

H-index: 10

North America-United States

Contact Luiz Irber

About Luiz Irber

Luiz Irber, With an exceptional h-index of 10 and a recent h-index of 10 (since 2020), a distinguished researcher at University of California, Davis, specializes in the field of Sketches, metagenomics.

His recent articles reflect a diverse array of research interests and contributions to the field:

Gibbs Sea Water Oceanographic Toolbox of TEOS-10 implemented in Rust

Amino Acid k-mers enable assembly-and alignment-free sequence analysis

Sourmash branchwater enables lightweight petabyte-scale sequence search

Meta-analysis of metagenomes via machine learning and assembly graphs reveals strain switches in Crohn’s disease

Protein k-mers enable assembly-free microbial metapangenomics

Charcoal: filtering contamination in metagenome-assembled genome bins and other genomes

genomeRxiv: a microbial whole-genome database and diagnostic marker design resource for classification, identification, and data sharing

Critical Assessment of Metagenome Interpretation: the second round of challenges

Luiz Irber Information

University

Position

___

Citations(all)

1141

Citations(since 2020)

924

Cited By

464

hIndex(all)

10

hIndex(since 2020)

10

i10Index(all)

11

i10Index(since 2020)

10

Email

University Profile Page

Google Scholar

Luiz Irber Skills & Research Interests

Sketches

metagenomics

Top articles of Luiz Irber

Gibbs Sea Water Oceanographic Toolbox of TEOS-10 implemented in Rust

Journal of Open Source Software

2024/1/3

Luiz Irber
Luiz Irber

H-Index: 7

Amino Acid k-mers enable assembly-and alignment-free sequence analysis

2022/11/22

Luiz Irber
Luiz Irber

H-Index: 7

Sourmash branchwater enables lightweight petabyte-scale sequence search

bioRxiv

2022/11/3

Luiz Irber
Luiz Irber

H-Index: 7

Meta-analysis of metagenomes via machine learning and assembly graphs reveals strain switches in Crohn’s disease

bioRxiv

2022/7/5

Luiz Irber
Luiz Irber

H-Index: 7

Dominik Moritz
Dominik Moritz

H-Index: 14

Felix Reidl
Felix Reidl

H-Index: 11

Protein k-mers enable assembly-free microbial metapangenomics

bioRxiv

2022/6/27

Luiz Irber
Luiz Irber

H-Index: 7

Charcoal: filtering contamination in metagenome-assembled genome bins and other genomes

2022/6/22

Luiz Irber
Luiz Irber

H-Index: 7

genomeRxiv: a microbial whole-genome database and diagnostic marker design resource for classification, identification, and data sharing

Access Microbiology

2022/5/27

Leighton Pritchard
Leighton Pritchard

H-Index: 26

Parul Sharma
Parul Sharma

H-Index: 3

Reza Mazloom
Reza Mazloom

H-Index: 4

Luiz Irber
Luiz Irber

H-Index: 7

Critical Assessment of Metagenome Interpretation: the second round of challenges

Nature methods

2022/4

Fernando Meyer
Fernando Meyer

H-Index: 1

David Koslicki
David Koslicki

H-Index: 12

Alexey Gurevich
Alexey Gurevich

H-Index: 17

Dmitry Antipov
Dmitry Antipov

H-Index: 12

Bo Chen
Bo Chen

H-Index: 1

Eleazar Eskin
Eleazar Eskin

H-Index: 58

Lars Hestbjerg Hansen
Lars Hestbjerg Hansen

H-Index: 42

Luiz Irber
Luiz Irber

H-Index: 7

Tue Sparholt Jørgensen
Tue Sparholt Jørgensen

H-Index: 10

Mikhail Kolmogorov
Mikhail Kolmogorov

H-Index: 10

Anton Korobeynikov
Anton Korobeynikov

H-Index: 21

Nathan Lapierre
Nathan Lapierre

H-Index: 3

Chenhao Li
Chenhao Li

H-Index: 12

Serghei Mangul
Serghei Mangul

H-Index: 21

Dmitry Meleshko
Dmitry Meleshko

H-Index: 11

Simon Rasmussen
Simon Rasmussen

H-Index: 47

Knut Reinert
Knut Reinert

H-Index: 34

Varuni Sarwal
Varuni Sarwal

H-Index: 3

Nicola Segata
Nicola Segata

H-Index: 55

Lizhen Shi
Lizhen Shi

H-Index: 4

Fengzhu Sun
Fengzhu Sun

H-Index: 35

Ashleigh Thomas
Ashleigh Thomas

H-Index: 2

Mirko Trajkovski
Mirko Trajkovski

H-Index: 17

Gherman Uritskiy
Gherman Uritskiy

H-Index: 6

Zhengyang Wang
Zhengyang Wang

H-Index: 10

Ziye Wang
Ziye Wang

H-Index: 3

Zhong Wang
Zhong Wang

H-Index: 1

Andrew Warren
Andrew Warren

H-Index: 12

Ronghui You
Ronghui You

H-Index: 9

Jie Zhu
Jie Zhu

H-Index: 5

Alexander Sczyrba
Alexander Sczyrba

H-Index: 30

Lightweight compositional analysis of metagenomes with FracMinHash and minimum metagenome covers

BioRxiv

2022/1/12

Luiz Irber
Luiz Irber

H-Index: 7

Taylor Reiter
Taylor Reiter

H-Index: 6

Mahmudur Rahman Hera
Mahmudur Rahman Hera

H-Index: 3

David Koslicki
David Koslicki

H-Index: 12

Biogeographic Distribution of Five Antarctic Cyanobacteria Using Large-Scale k-mer Searching with sourmash branchwater

Frontiers in Microbiology

2024/2/19

Christen L Grettenberger
Christen L Grettenberger

H-Index: 6

Luiz Irber
Luiz Irber

H-Index: 7

genomeRxiv: a microbial whole-genome database for classification, identification, and data sharing

2021/4/6

Leighton Pritchard
Leighton Pritchard

H-Index: 26

Luiz Irber
Luiz Irber

H-Index: 7

Reza Mazloom
Reza Mazloom

H-Index: 4

Parul Sharma
Parul Sharma

H-Index: 3

Context-aware genomic surveillance reveals hidden transmission of a carbapenemase-producing Klebsiella pneumoniae

Microbial genomics

2021/12/16

Christian Brandt
Christian Brandt

H-Index: 6

Luiz Irber
Luiz Irber

H-Index: 7

Christoph Lübbert
Christoph Lübbert

H-Index: 17

Streamlining data-intensive biology with workflow systems

GigaScience

2021/1

Taylor Reiter
Taylor Reiter

H-Index: 6

Luiz Irber
Luiz Irber

H-Index: 7

Shannon Ek Joslin
Shannon Ek Joslin

H-Index: 3

Camille Scott
Camille Scott

H-Index: 5

Decentralizing Indices for Genomic Data

2020

See List of Professors in Luiz Irber University(University of California, Davis)

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