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Kaili Fan

About Kaili Fan

Kaili Fan, With an exceptional h-index of 10 and a recent h-index of 10 (since 2020), a distinguished researcher at University of Massachusetts Medical School, specializes in the field of bioinformatics, computational biology, genomic, epigenomic.

His recent articles reflect a diverse array of research interests and contributions to the field:

Mammalian evolution of human cis-regulatory elements and transcription factor binding sites

Toward a comprehensive catalog of regulatory elements

An encyclopedia of enhancer-gene regulatory interactions in the human genome

Evolutionary constraint and innovation across hundreds of placental mammals

Integration of high-resolution promoter profiling assays reveals novel, cell type–specific transcription start sites across 115 human cell and tissue types

Genetic and epigenetic features of promoters with ubiquitous chromatin accessibility support ubiquitous transcription of cell-essential genes

Annotation of chromatin states in 66 complete mouse epigenomes during development

Long first exons and epigenetic marks distinguish conserved pachytene piRNA clusters from other mammalian genes

Kaili Fan Information

University

Position

PhD student of the

Citations(all)

419

Citations(since 2020)

322

Cited By

180

hIndex(all)

10

hIndex(since 2020)

10

i10Index(all)

10

i10Index(since 2020)

10

Email

University Profile Page

Google Scholar

Kaili Fan Skills & Research Interests

bioinformatics

computational biology

genomic

epigenomic

Top articles of Kaili Fan

Mammalian evolution of human cis-regulatory elements and transcription factor binding sites

Science

2023/4/28

Kaili Fan
Kaili Fan

H-Index: 5

Matteo Bianchi
Matteo Bianchi

H-Index: 8

Joana Damas
Joana Damas

H-Index: 15

Mark Diekhans
Mark Diekhans

H-Index: 48

Eduardo Eizirik
Eduardo Eizirik

H-Index: 33

Kaili Fan
Kaili Fan

H-Index: 5

Jenna Grimshaw
Jenna Grimshaw

H-Index: 2

Graham M Hughes
Graham M Hughes

H-Index: 12

Jeremy Johnson
Jeremy Johnson

H-Index: 2

David Juan
David Juan

H-Index: 18

Thomas Lehmann
Thomas Lehmann

H-Index: 7

Xue Li
Xue Li

H-Index: 1

Abigail Lind
Abigail Lind

H-Index: 11

Tomas Marques-Bonet
Tomas Marques-Bonet

H-Index: 54

Austin Osmanski
Austin Osmanski

H-Index: 2

Benedict Paten
Benedict Paten

H-Index: 46

Andreas R Pfenning
Andreas R Pfenning

H-Index: 15

Katherine S Pollard
Katherine S Pollard

H-Index: 54

David A Ray
David A Ray

H-Index: 27

Steven K Reilly
Steven K Reilly

H-Index: 11

Louise Ryan
Louise Ryan

H-Index: 31

Beth Shapiro
Beth Shapiro

H-Index: 53

Chaitanya Srinivasan
Chaitanya Srinivasan

H-Index: 0

Patrick F Sullivan
Patrick F Sullivan

H-Index: 101

Ross Swofford
Ross Swofford

H-Index: 17

Emma Teeling
Emma Teeling

H-Index: 36

Chao Wang
Chao Wang

H-Index: 6

Toward a comprehensive catalog of regulatory elements

Human Genetics

2023/3/19

Kaili Fan
Kaili Fan

H-Index: 5

An encyclopedia of enhancer-gene regulatory interactions in the human genome

bioRxiv

2023/11/13

Kushal K Dey
Kushal K Dey

H-Index: 10

Evelyn Jagoda
Evelyn Jagoda

H-Index: 6

Wang Xi
Wang Xi

H-Index: 2

Muhammad S Shamim
Muhammad S Shamim

H-Index: 13

Jacob C Ulirsch
Jacob C Ulirsch

H-Index: 25

Kaili Fan
Kaili Fan

H-Index: 5

Hilary K Finucane
Hilary K Finucane

H-Index: 40

Manolis Kellis
Manolis Kellis

H-Index: 111

Michael C Bassik
Michael C Bassik

H-Index: 39

Anshul Kundaje
Anshul Kundaje

H-Index: 49

Evolutionary constraint and innovation across hundreds of placental mammals

Science

2023/4/28

Graham M Hughes
Graham M Hughes

H-Index: 12

Xue Li
Xue Li

H-Index: 1

Patrick F Sullivan
Patrick F Sullivan

H-Index: 101

Matteo Bianchi
Matteo Bianchi

H-Index: 8

Mark Diekhans
Mark Diekhans

H-Index: 48

Louise Ryan
Louise Ryan

H-Index: 31

Ross Swofford
Ross Swofford

H-Index: 17

Ashley R Brown
Ashley R Brown

H-Index: 5

Joana Damas
Joana Damas

H-Index: 15

Kaili Fan
Kaili Fan

H-Index: 5

Jenna Grimshaw
Jenna Grimshaw

H-Index: 2

Jeremy Johnson
Jeremy Johnson

H-Index: 2

Austin Osmanski
Austin Osmanski

H-Index: 2

Steven K Reilly
Steven K Reilly

H-Index: 11

Tomas Marques-Bonet
Tomas Marques-Bonet

H-Index: 54

Beth Shapiro
Beth Shapiro

H-Index: 53

Benedict Paten
Benedict Paten

H-Index: 46

Katherine S Pollard
Katherine S Pollard

H-Index: 54

David A Ray
David A Ray

H-Index: 27

Andreas R Pfenning
Andreas R Pfenning

H-Index: 15

Integration of high-resolution promoter profiling assays reveals novel, cell type–specific transcription start sites across 115 human cell and tissue types

Genome Research

2022/2/1

Xiao-Ou Zhang
Xiao-Ou Zhang

H-Index: 15

Kaili Fan
Kaili Fan

H-Index: 5

Fairlie Reese
Fairlie Reese

H-Index: 2

Ali Mortazavi
Ali Mortazavi

H-Index: 2

Genetic and epigenetic features of promoters with ubiquitous chromatin accessibility support ubiquitous transcription of cell-essential genes

Nucleic acids research

2021/6/4

Kaili Fan
Kaili Fan

H-Index: 5

Xiao-Ou Zhang
Xiao-Ou Zhang

H-Index: 15

Annotation of chromatin states in 66 complete mouse epigenomes during development

Communications Biology

2021/2/22

Arjan Van Der Velde
Arjan Van Der Velde

H-Index: 5

Kaili Fan
Kaili Fan

H-Index: 5

Junko Tsuji
Junko Tsuji

H-Index: 11

Long first exons and epigenetic marks distinguish conserved pachytene piRNA clusters from other mammalian genes

Nature communications

2021/1/4

Kaili Fan
Kaili Fan

H-Index: 5

Gen Zhang
Gen Zhang

H-Index: 1

Yu Fu
Yu Fu

H-Index: 14

Evolutionarily conserved pachytene piRNA loci are highly divergent among modern humans

Nature ecology & evolution

2020/1

Ildar Gainetdinov
Ildar Gainetdinov

H-Index: 12

Yasin Kaymaz
Yasin Kaymaz

H-Index: 9

Pei-Hsuan Wu
Pei-Hsuan Wu

H-Index: 10

Kaili Fan
Kaili Fan

H-Index: 5

Alper Kucukural
Alper Kucukural

H-Index: 16

See List of Professors in Kaili Fan University(University of Massachusetts Medical School)

Co-Authors

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