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Jonathan Warrell

Jonathan Warrell

Yale University

H-index: 24

North America-United States

Contact Jonathan Warrell

About Jonathan Warrell

Jonathan Warrell, With an exceptional h-index of 24 and a recent h-index of 19 (since 2020), a distinguished researcher at Yale University, specializes in the field of Machine Learning, Computational Biology, Computer Vision.

His recent articles reflect a diverse array of research interests and contributions to the field:

Spatial-specific gene signatures to predict immunotherapy outcomes in lung cancer

Latent evolutionary signatures: a general framework for analysing music and cultural evolution

Single-cell genomics and regulatory networks for 388 human brains

-QVAE: A Quantum Variational Autoencoder utilizing Regularized Mixed-state Latent Representations

A Variational Graph Partitioning Approach to Modeling Protein Liquid-liquid Phase Separation

Author Correction: Comprehensive analysis of chromothripsis in 2,658 human cancers using whole-genome sequencing

Meta-MeTTa: an operational semantics for MeTTa

Genetic determination of regional connectivity in modelling the spread of COVID-19 outbreak for more efficient mitigation strategies

Jonathan Warrell Information

University

Position

___

Citations(all)

5185

Citations(since 2020)

3395

Cited By

2978

hIndex(all)

24

hIndex(since 2020)

19

i10Index(all)

30

i10Index(since 2020)

24

Email

University Profile Page

Google Scholar

Jonathan Warrell Skills & Research Interests

Machine Learning

Computational Biology

Computer Vision

Top articles of Jonathan Warrell

Spatial-specific gene signatures to predict immunotherapy outcomes in lung cancer

Cancer Research

2024/3/22

Myrto Moutafi
Myrto Moutafi

H-Index: 2

Arutha Kulasinghe
Arutha Kulasinghe

H-Index: 16

Ioannis Vathiotis
Ioannis Vathiotis

H-Index: 5

Latent evolutionary signatures: a general framework for analysing music and cultural evolution

bioRxiv

2020/10/25

Jonathan Warrell
Jonathan Warrell

H-Index: 16

Leonidas Salichos
Leonidas Salichos

H-Index: 11

Mark Gerstein
Mark Gerstein

H-Index: 107

Single-cell genomics and regulatory networks for 388 human brains

bioRxiv

2024/3/19

Matthew Jensen
Matthew Jensen

H-Index: 8

Jonathan Warrell
Jonathan Warrell

H-Index: 16

Chirag Gupta
Chirag Gupta

H-Index: 4

Ran Meng
Ran Meng

H-Index: 13

Shaoke Lou
Shaoke Lou

H-Index: 13

Yuhang Chen
Yuhang Chen

H-Index: 0

Zhiyuan Chu
Zhiyuan Chu

H-Index: 1

Yunyang Li
Yunyang Li

H-Index: 3

Pengyu Ni
Pengyu Ni

H-Index: 3

Xiao Zhou
Xiao Zhou

H-Index: 8

Tanima Chatterjee
Tanima Chatterjee

H-Index: 2

Ziheng Duan
Ziheng Duan

H-Index: 2

Ella Henry
Ella Henry

H-Index: 10

Ting Jin
Ting Jin

H-Index: 14

Riki Kawaguchi
Riki Kawaguchi

H-Index: 25

Junhao Liu
Junhao Liu

H-Index: 8

Shuang Liu
Shuang Liu

H-Index: 9

Shaojie Ma
Shaojie Ma

H-Index: 4

Henry Pratt
Henry Pratt

H-Index: 5

Brie Wamsley
Brie Wamsley

H-Index: 4

Yan Xia
Yan Xia

H-Index: 23

Donghoon Lee
Donghoon Lee

H-Index: 13

Panos Roussos
Panos Roussos

H-Index: 57

Nenad Sestan
Nenad Sestan

H-Index: 57

Hyejung Won
Hyejung Won

H-Index: 27

Jing Zhang
Jing Zhang

H-Index: 7

Daifeng Wang
Daifeng Wang

H-Index: 17

Mark Gerstein
Mark Gerstein

H-Index: 107

-QVAE: A Quantum Variational Autoencoder utilizing Regularized Mixed-state Latent Representations

arXiv preprint arXiv:2402.17749

2024/2/27

Jonathan Warrell
Jonathan Warrell

H-Index: 16

Mark Gerstein
Mark Gerstein

H-Index: 107

A Variational Graph Partitioning Approach to Modeling Protein Liquid-liquid Phase Separation

bioRxiv

2024

Jonathan Warrell
Jonathan Warrell

H-Index: 16

Mark Gerstein
Mark Gerstein

H-Index: 107

Author Correction: Comprehensive analysis of chromothripsis in 2,658 human cancers using whole-genome sequencing

Nature genetics

2023/6

Jake June-Koo Lee
Jake June-Koo Lee

H-Index: 23

Ruibin Xi
Ruibin Xi

H-Index: 25

Dhawal Jain
Dhawal Jain

H-Index: 8

Lixing Yang
Lixing Yang

H-Index: 40

Peter J Park
Peter J Park

H-Index: 84

Meta-MeTTa: an operational semantics for MeTTa

arXiv preprint arXiv:2305.17218

2023/5/26

Jonathan Warrell
Jonathan Warrell

H-Index: 16

Genetic determination of regional connectivity in modelling the spread of COVID-19 outbreak for more efficient mitigation strategies

Scientific Reports

2023/5/25

Leonidas Salichos
Leonidas Salichos

H-Index: 11

Jonathan Warrell
Jonathan Warrell

H-Index: 16

Mark Gerstein
Mark Gerstein

H-Index: 107

Author Correction: Pan-cancer analysis of whole genomes

Nature

2023/2/16

Insights from incorporating quantum computing into drug design workflows

Bioinformatics

2023/1/1

Jonathan Warrell
Jonathan Warrell

H-Index: 16

127 Spatial-specific gene signatures outperform bulk-mRNA signatures to define resistance to immunotherapy in melanoma patients

2022/11/1

Jonathan Warrell
Jonathan Warrell

H-Index: 16

David Rimm
David Rimm

H-Index: 68

133 Spatially defined gene signatures uncover the association of extracellular matrix genes with immunotherapy resistance in head and neck squamous cell carcinoma

2022/11/1

Jonathan Warrell
Jonathan Warrell

H-Index: 16

Amanda Psyrri
Amanda Psyrri

H-Index: 38

David Rimm
David Rimm

H-Index: 68

A meta-probabilistic-programming language for bisimulation of probabilistic and non-well-founded type systems

2022/8/19

Jonathan Warrell
Jonathan Warrell

H-Index: 16

Higher-Order Generalization Bounds: Learning Deep Probabilistic Programs via PAC-Bayes Objectives

arXiv preprint arXiv:2203.15972

2022/3/30

Jonathan Warrell
Jonathan Warrell

H-Index: 16

Mark Gerstein
Mark Gerstein

H-Index: 107

Interrogating RNA and protein spatial subcellular distribution in smFISH data with DypFISH

Cell Reports Methods

2021/9/27

Emmanuel Bouilhol
Emmanuel Bouilhol

H-Index: 1

Macha Nikolski
Macha Nikolski

H-Index: 19

A new tool for technical standardization of the Ki67 immunohistochemical assay

Modern Pathology

2021/7

Thazin Nwe Aung
Thazin Nwe Aung

H-Index: 7

Jonathan Warrell
Jonathan Warrell

H-Index: 16

Patricia Gaule
Patricia Gaule

H-Index: 8

Ioannis Vathiotis
Ioannis Vathiotis

H-Index: 5

Saba Shafi
Saba Shafi

H-Index: 2

Myrto Moutafi
Myrto Moutafi

H-Index: 2

Mark Gerstein
Mark Gerstein

H-Index: 107

Quantum computing at the frontiers of biological sciences

Nature Methods

2021/7

Jonathan Warrell
Jonathan Warrell

H-Index: 16

Alan Anticevic
Alan Anticevic

H-Index: 42

Stefan Bekiranov
Stefan Bekiranov

H-Index: 26

Michael Gandal
Michael Gandal

H-Index: 30

Guillermo Sapiro
Guillermo Sapiro

H-Index: 69

Jacob Taylor
Jacob Taylor

H-Index: 45

Cyclic and multilevel causation in evolutionary processes

Biology & Philosophy

2020/10

Jonathan Warrell
Jonathan Warrell

H-Index: 16

Mark Gerstein
Mark Gerstein

H-Index: 107

Retrospective evaluation of whole exome and genome mutation calls in 746 cancer samples

2020/9/21

Liang-Bo Wang
Liang-Bo Wang

H-Index: 11

Yize Li
Yize Li

H-Index: 11

Alex Buchanan
Alex Buchanan

H-Index: 8

Kyle Covington
Kyle Covington

H-Index: 7

Li Ding
Li Ding

H-Index: 2

Yu Fan
Yu Fan

H-Index: 8

Steven Foltz
Steven Foltz

H-Index: 10

Gad Getz
Gad Getz

H-Index: 174

David Haussler
David Haussler

H-Index: 115

Cyriac Kandoth
Cyriac Kandoth

H-Index: 60

Ignaty Leshchiner
Ignaty Leshchiner

H-Index: 28

Michael D Mclellan
Michael D Mclellan

H-Index: 79

Chip Stewart
Chip Stewart

H-Index: 51

Wenyi Wang
Wenyi Wang

H-Index: 3

Kai Ye
Kai Ye

H-Index: 35

Matthias Bieg
Matthias Bieg

H-Index: 14

Ken Chen
Ken Chen

H-Index: 2

Zechen Chong
Zechen Chong

H-Index: 23

Roland Eils
Roland Eils

H-Index: 65

Shengjie Gao
Shengjie Gao

H-Index: 10

Vincent Huang
Vincent Huang

H-Index: 0

Yi Huang
Yi Huang

H-Index: 8

David R Jones
David R Jones

H-Index: 3

Sushant Kumar
Sushant Kumar

H-Index: 3

Yogesh Kumar
Yogesh Kumar

H-Index: 0

Dimitri Livitz
Dimitri Livitz

H-Index: 17

Morten Muhlig Nielsen
Morten Muhlig Nielsen

H-Index: 21

Jakob Skou Pedersen
Jakob Skou Pedersen

H-Index: 35

Matthias Schlesner
Matthias Schlesner

H-Index: 38

Jiayin Wang
Jiayin Wang

H-Index: 26

Joachim Weischenfeldt
Joachim Weischenfeldt

H-Index: 26

Johannes Werner
Johannes Werner

H-Index: 4

Hong Xue
Hong Xue

H-Index: 22

Nishant Agrawal
Nishant Agrawal

H-Index: 3

Sex differences in oncogenic mutational processes

2020/8/28

Gurnit Atwal
Gurnit Atwal

H-Index: 3

Vikram Deshpande
Vikram Deshpande

H-Index: 68

Levi Garraway
Levi Garraway

H-Index: 109

Gad Getz
Gad Getz

H-Index: 174

Syed Haider
Syed Haider

H-Index: 2

Wei Jiao
Wei Jiao

H-Index: 5

Constance H Li
Constance H Li

H-Index: 5

Paz Polak
Paz Polak

H-Index: 31

Mark A Rubin
Mark A Rubin

H-Index: 115

Chin-Lee Wu
Chin-Lee Wu

H-Index: 39

Ke Yuan
Ke Yuan

H-Index: 10

Nishant Agrawal
Nishant Agrawal

H-Index: 3

Philip Awadalla
Philip Awadalla

H-Index: 50

John Bartlett
John Bartlett

H-Index: 13

Claudio Bassi
Claudio Bassi

H-Index: 74

Prashant Bavi
Prashant Bavi

H-Index: 24

Benjamin P Berman
Benjamin P Berman

H-Index: 39

Rameen Beroukhim
Rameen Beroukhim

H-Index: 115

Vinayak Bhandari
Vinayak Bhandari

H-Index: 8

Matthias Bieg
Matthias Bieg

H-Index: 14

Arnoud Boot
Arnoud Boot

H-Index: 30

See List of Professors in Jonathan Warrell University(Yale University)