Jeremy Swann
University of Oxford
H-index: 14
Europe-United Kingdom
Top articles of Jeremy Swann
Discordance between different bioinformatic methods for identifying resistance genes from short-read genomic data, with a focus on Escherichia coli
Microbial Genomics
2023/12/15
Jeremy Swann
H-Index: 6
Susan Hopkins
H-Index: 8
SARS-CoV-2 sequencing with cloud-based analysis illustrates expedient co-ordinated surveillance of viral genomic epidemiology across six continents
medRxiv
2023/11/27
Penicillin Binding Protein Substitutions Cooccur with Fluoroquinolone Resistance in Epidemic Lineages of Multidrug-Resistant Clostridioides difficile
Mbio
2023/4/25
Jeremy Swann
H-Index: 6
ReadItAndKeep: rapid decontamination of SARS-CoV-2 sequencing reads
Bioinformatics
2022/6/15
Jeremy Swann
H-Index: 6
Bede Constantinides
H-Index: 5
An observational cohort study on the incidence of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection and B. 1.1. 7 variant infection in healthcare workers …
Clinical Infectious Diseases
2022/4/1
Rapid turnaround multiplex sequencing of SARS-CoV-2: comparing tiling amplicon protocol performance
medRxiv
2022/1/1
Genomic epidemiology and longitudinal sampling of ward wastewater environments and patients reveals complexity of the transmission dynamics of bla KPC-carbapenemase-producing …
Medrxiv
2021/12/1
Epidemiological data and genome sequencing reveals that nosocomial transmission of SARS-CoV-2 is underestimated and mostly mediated by a small number of highly infectious …
Journal of Infection
2021/10/1
Bede Constantinides
H-Index: 5
Gillian Rodger
H-Index: 5
Jeremy Swann
H-Index: 6
Timothy M Walker
H-Index: 28
The duration, dynamics, and determinants of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) antibody responses in individual healthcare workers
Clinical Infectious Diseases
2021/8/1
Genomic network analysis of environmental and livestock F-type plasmid populations
The ISME Journal
2021/8
Population-level faecal metagenomic profiling as a tool to predict antimicrobial resistance in Enterobacterales isolates causing invasive infections: An exploratory study …
EClinicalMedicine
2021/6/1
Niche and local geography shape the pangenome of wastewater-and livestock-associated Enterobacteriaceae
Science advances
2021/4/9
Differential occupational risks to healthcare workers from SARS-CoV-2 observed during a prospective observational study
elife
2020/8/21
Reconciling the potentially irreconcilable? Genotypic and phenotypic amoxicillin-clavulanate resistance in Escherichia coli
Antimicrobial agents and chemotherapy
2020/5/21
Metrics for public health perspective surveillance of bacterial antibiotic resistance in low-and middle-income countries
Biorxiv
2020/2/11
Optimized use of Oxford Nanopore flowcells for hybrid assemblies
Microbial genomics
2020/11
Jeremy Swann
H-Index: 6
High precision Neisseria gonorrhoeae variant and antimicrobial resistance calling from metagenomic Nanopore sequencing
Genome research
2020/9/1
Nicholas D Sanderson
H-Index: 12
Jeremy Swann
H-Index: 6
Co-Authors
