David Koslicki
Penn State University
H-index: 21
North America-United States
Top articles of David Koslicki
YACHT: an ANI-based statistical test to detect microbial presence/absence in a metagenomic sample
Bioinformatics
2024/2/1
David Koslicki
H-Index: 12
Alexei Novikov
H-Index: 11
MetagenomicKG: a knowledge graph for metagenomic applications
bioRxiv
2024
Shaopeng Liu
H-Index: 3
David Koslicki
H-Index: 12
An approach for collaborative development of a federated biomedical knowledge graph-based question-answering system: Question-of-the-Month challenges
Journal of Clinical and Translational Science
2023/1
KGML-xDTD: a knowledge graph–based machine learning framework for drug treatment prediction and mechanism description
GigaScience
2023
TAMPA: interpretable analysis and visualization of metagenomics-based taxon abundance profiles
GigaScience
2023
A translational approach to identifying and targeting TNF signaling in idiopathic multicentric Castleman disease
Blood
2023/11/28
Prokrustean graph: An efficient data structure used to extract sequence information for arbitrary k-mer size ranges
bioRxiv
2023/11/21
David Koslicki
H-Index: 12
Connecting Syncmers to FracMinHash: similarities and advantages
bioRxiv
2023/11/13
Shaopeng Liu
H-Index: 3
David Koslicki
H-Index: 12
Fast, lightweight, and accurate metagenomic functional profiling using FracMinHash sketches
bioRxiv
2023
Deriving confidence intervals for mutation rates across a wide range of evolutionary distances using FracMinHash
Genome research
2023/7/1
Mahmudur Rahman Hera
H-Index: 3
David Koslicki
H-Index: 12
Finding phylogeny-aware and biologically meaningful averages of metagenomic samples: L2UniFrac
Bioinformatics
2023/6/1
Wei Wei
H-Index: 5
David Koslicki
H-Index: 12
ARAX: a graph-based modular reasoning tool for translational biomedicine
Bioinformatics
2023/3/1
Critical assessment of metagenome interpretation: the second round of challenges
Nature methods
2022/4
Fernando Meyer
H-Index: 1
David Koslicki
H-Index: 12
Alexey Gurevich
H-Index: 17
Dmitry Antipov
H-Index: 12
Bo Chen
H-Index: 1
Eleazar Eskin
H-Index: 58
Lars Hestbjerg Hansen
H-Index: 42
Luiz Irber
H-Index: 7
Tue Sparholt Jørgensen
H-Index: 10
Mikhail Kolmogorov
H-Index: 10
Anton Korobeynikov
H-Index: 21
Nathan Lapierre
H-Index: 3
Chenhao Li
H-Index: 12
Serghei Mangul
H-Index: 21
Dmitry Meleshko
H-Index: 11
Simon Rasmussen
H-Index: 47
Knut Reinert
H-Index: 34
Varuni Sarwal
H-Index: 3
Nicola Segata
H-Index: 55
Lizhen Shi
H-Index: 4
Fengzhu Sun
H-Index: 35
Ashleigh Thomas
H-Index: 2
Mirko Trajkovski
H-Index: 17
Gherman Uritskiy
H-Index: 6
Zhengyang Wang
H-Index: 10
Ziye Wang
H-Index: 3
Zhong Wang
H-Index: 1
Andrew Warren
H-Index: 12
Ronghui You
H-Index: 9
Jie Zhu
H-Index: 5
Alexander Sczyrba
H-Index: 30
PressPurt: network sensitivity to press perturbations under interaction uncertainty
F1000Research
2022/2/11
David Koslicki
H-Index: 12
Mark Novak
H-Index: 20
The Statistics of k-mers from a Sequence Undergoing a Simple Mutation Process Without Spurious Matches
Journal of Computational Biology
2022/2/1
Using the UniFrac metric on Whole Genome Shotgun data
bioRxiv
2022/1/20
Wei Wei
H-Index: 5
David Koslicki
H-Index: 12
Lightweight compositional analysis of metagenomes with FracMinHash and minimum metagenome covers
BioRxiv
2022/1/12
WGSUniFrac: applying UniFrac metric to whole genome shotgun data
2022
Wei Wei
H-Index: 5
David Koslicki
H-Index: 12
RTX-KG2: a system for building a semantically standardized knowledge graph for translational biomedicine
BMC bioinformatics
2022/9/29
Progress toward a universal biomedical data translator
2022/8
Hao Xu
H-Index: 3
Michel Dumontier
H-Index: 37
Qian Zhu
H-Index: 12
Michael Bada
H-Index: 11
Andrew Baumgartner
H-Index: 5
Remzi Celebi
H-Index: 5
Stephen Edwards
H-Index: 19
Vincent Emonet
H-Index: 9
Jason Flannick
H-Index: 37
Amy Glen
H-Index: 7
Prateek Goel
H-Index: 4
Kristina Hanspers
H-Index: 20
Andrew Hoffman
H-Index: 46
Robert Hubal
H-Index: 11
Jimin Kang
H-Index: 2
Michael Knowles
H-Index: 57
Daniel Korn
H-Index: 6
David Koslicki
H-Index: 12
Ashok Krishnamurthy
H-Index: 6
Jay Lee
H-Index: 62
Jason Lin
H-Index: 7
Zheng Liu
H-Index: 8
Shaopeng Liu
H-Index: 3
Luis Mendoza
H-Index: 13
Matthew Might
H-Index: 24
Sandrine Muller
H-Index: 4
Co-Authors
